Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1554 ATGGAGACTTGCGCCGCCGCAAAGAGAAAGCAAAGCACTGCCCCCGCAGTCGTGGTCCAGAAACAACATCCCAAAAGGCAACGGGTTGCGTTGGCTGAACTTCCCAATTCACCAAACCTTATTCTCCCCGAAACTCTGAATCCTGGCAAAGAAAAGCTGCAATGTCCGAATAATCCCAATCCCACAAACAACACCCTTACTTCCCCCCAGATTGGTGAACCTTATGTTTCTGAAATCCACGAGTATCTTCGTGCAATGGAGAGAAAGAGAAGACCAATGAGTGACTACATTGAGAAAGTTCAGAAAGAAGTTATGCCAAACATGAGAGCAATATTGGTGGATTGGTTGGTGGAGGTTGCTGAGGATTACAATCTTCTCTCCGATACTCTTCATCTCTCTGTGTCATACATTGATAGGTTTTTATCAGTTAATTCCGTACTTAAATCGAGGTTTCAGTTGTTGGGCGTTTCCTCCATGTTCATTGCTTCGAAGTATGAGGAAATTGATCCACCCGATGTGGATGAGTTCTGCAGCATCACTGATAACACTTGCGACAAGACAGAGGTTGTAAATATGGAAGCTGAAATACTAAAGTCCCTAAATTTTGAAATGGGCCATCCAACTGTAAACACTTTTCTAAGGAGTTTTTTTGCAGTTGCCTCCAAGAACCAAAATCGTCCAAATTTGCAAATTGAATTTATGAGCTGCTATCTTGCTGAGCTAAGTTTGTTGGATTATGATTGCATAAGATTCTTGCCTTCCATTGTGGCCGCGTCTGTTGTATTTCTTGCCAGATTTATTATTCAACCTGAAGTGCATCCATGGACTTCTTCCTTGTGTGAATACTGGGGTTACAAACCAGTTGAATTGAAAGAATGTGTCCTCATCTTGCATGACTTGTATTTGTCAAGAAAGGCAGCGTCCTTCCAATCTGTAAGGGATAAATACAAGCAGCACAAGTTCAAATACGTGGCAAACCTGTATTCTCCCAAATATGTACCAAGTTGTTACTTTGAAGACCAGCGATGCAGTGAATTCCCTGATACGCCAATGATTGAGTGA 1062 0.4228 METCAAAKRKQSTAPAVVVQKQHPKRQRVALAELPNSPNLILPETLNPGKEKLQCPNNPNPTNNTLTSPQIGEPYVSEIHEYLRAMERKRRPMSDYIEKVQKEVMPNMRAILVDWLVEVAEDYNLLSDTLHLSVSYIDRFLSVNSVLKSRFQLLGVSSMFIASKYEEIDPPDVDEFCSITDNTCDKTEVVNMEAEILKSLNFEMGHPTVNTFLRSFFAVASKNQNRPNLQIEFMSCYLAELSLLDYDCIRFLPSIVAASVVFLARFIIQPEVHPWTSSLCEYWGYKPVELKECVLILHDLYLSRKAASFQSVRDKYKQHKFKYVANLYSPKYVPSCYFEDQRCSEFPDTPMIE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1554 353 SUPERFAMILY Cyclin-like 207 332 IPR036915 -
Aed4g1554 353 Pfam Cyclin, N-terminal domain 78 204 IPR006671 -
Aed4g1554 353 CDD CYCLIN 108 197 IPR013763 -
Aed4g1554 353 Gene3D - 92 205 - -
Aed4g1554 353 SUPERFAMILY Cyclin-like 68 204 IPR036915 -
Aed4g1554 353 SMART Cyclin_C_2 207 330 IPR004367 -
Aed4g1554 353 PANTHER CYCLINS 61 341 IPR039361 -
Aed4g1554 353 CDD CYCLIN 207 298 IPR013763 -
Aed4g1554 353 ProSitePatterns Cyclins signature. 109 140 IPR006671 -
Aed4g1554 353 Gene3D - 78 326 - -
Aed4g1554 353 SMART cyclin_7 114 198 IPR013763 -
Aed4g1554 353 SMART cyclin_7 211 299 IPR013763 -
Aed4g1554 353 Pfam Cyclin, C-terminal domain 207 327 IPR004367 -
Aed4g1554 353 PANTHER CYCLIN-A3-1-RELATED 61 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1554 Aed-Chr4 20463408 20465146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1554 3 340 Core Cell Cycle Gene Families AT5G43080 54.624 1.59e-124 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1554 K06627 - gmx:547779 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1554 4 20463408 20465146 Aed4g1554 4 20463408 20465146 ECH