Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1552 ACACGCCAAATCATTTTCATTTTCATTTTCCAAACCGCCATTTGTCTTATACATAAACATGTCAACACTTTCTCTCACACTCACCCAACACTTCAACTCCATCTTCTTCCATTCCTTTGCTCTCTCCCTCTCTGTTCTAAATTCACAAGACACAGGAAGAAGAGGAAGATGGAGACTCGTGCTGCCACAAAGAGAAAGGCAAACTCTGCCACTGAAGTCGTTGTCCAAAGACCACACCCCAAGCGGCAGCGCATTGTGCTGGGTGAACTTCCCAATTTACCAAACATTATTGTCCCTGAATCTCAAAATCTCAGCAAAAAGAATCTCCATTGTTTGAAGAATCTCAATGTAAAGAAACAATCACCCACGAATAACACCCTTTCCTCCGCTCAGATTGATGAAGCTTATGTTTCAGACATCCACGAGTATCTCCGTGAAATGGAGATGCATAAAAAGAGAAGACCAATGATTGATTACATTGAGAAAGTTCAGAAAATAGTTACACCAACCATGAGAGCAATATTGGTGGATTGGCTAGTGGAGGTAGCTGAGGAGTACAAGCTTCTCTCTGATACTCTTCATCTGTCTGTATCATATGTTGATAGGTTTTTATCAGTTAATCCTGTCACTAAATCAAGACTTCAGTTACTGGGTGTTTCGTCCATGCTCATTGCTTCAAAATATGAGGAAACGGACCCACCCAGTGTGGATGAATTTTGCAGTATCACTGATAACACATATGAAAAGGCAGAGGTTGTGAAAATGGAAGCTGAGATACTGAAGTCCCTAAAGTTTGAAATGGGAAATCCTACTGTAAGCACCTTTATAAGGAGGTATGCTAATGTTGCTTCTGATAACAAAAAAATTCCAAATTCTCAGATTGATTTTTTGGGCAGCTATCTTGCTGAGCTAAGTTTGTTGGACTATGATTGTTTAAGATTCTTGCCTTCTATTGTGGCTGCCTCGGTTATATTTCTTGCCAAGTTCATTATCTGCCCTGAAGTGCATCCTTGGACTTCTTCCTTGAGTGAATGTTTGGGTTACAAACCTGCTGAGTTGAAAGAATGTGTCCTCATCTTACATGACTTGTATTTGTCAAGAAAGGCAGCAACCTTCAAAGCTGTTAGGGAGAAATACAAGCAGCTCAAGTTCAAATGTGTGGCAAACCTGCCTACCCCTCCGTATGTACCAAGTTGTTACTTTGAAGACCAGTGA 1215 0.4074 TRQIIFIFIFQTAICLIHKHVNTFSHTHPTLQLHLLPFLCSLPLCSKFTRHRKKRKMETRAATKRKANSATEVVVQRPHPKRQRIVLGELPNLPNIIVPESQNLSKKNLHCLKNLNVKKQSPTNNTLSSAQIDEAYVSDIHEYLREMEMHKKRRPMIDYIEKVQKIVTPTMRAILVDWLVEVAEEYKLLSDTLHLSVSYVDRFLSVNPVTKSRLQLLGVSSMLIASKYEETDPPSVDEFCSITDNTYEKAEVVKMEAEILKSLKFEMGNPTVSTFIRRYANVASDNKKIPNSQIDFLGSYLAELSLLDYDCLRFLPSIVAASVIFLAKFIICPEVHPWTSSLSECLGYKPAELKECVLILHDLYLSRKAATFKAVREKYKQLKFKCVANLPTPPYVPSCYFEDQ 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1552 404 SUPERFAMILY Cyclin-like 270 395 IPR036915 -
Aed4g1552 404 SMART Cyclin_C_2 270 393 IPR004367 -
Aed4g1552 404 SUPERFAMILY Cyclin-like 132 267 IPR036915 -
Aed4g1552 404 CDD CYCLIN 171 260 IPR013763 -
Aed4g1552 404 SMART cyclin_7 274 362 IPR013763 -
Aed4g1552 404 SMART cyclin_7 177 261 IPR013763 -
Aed4g1552 404 CDD CYCLIN 270 361 IPR013763 -
Aed4g1552 404 PANTHER CYCLIN-A3-1-RELATED 77 403 - -
Aed4g1552 404 PIRSF Cyclin_A_B_D_E 42 398 IPR039361 -
Aed4g1552 404 Gene3D - 153 268 - -
Aed4g1552 404 Gene3D - 139 389 - -
Aed4g1552 404 PANTHER CYCLINS 77 403 IPR039361 -
Aed4g1552 404 ProSitePatterns Cyclins signature. 172 203 IPR006671 -
Aed4g1552 404 Pfam Cyclin, C-terminal domain 270 392 IPR004367 -
Aed4g1552 404 Pfam Cyclin, N-terminal domain 139 267 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1552 Aed-Chr4 20455850 20457696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1552 59 403 Core Cell Cycle Gene Families AT5G43080 56.180 2.35e-131 379