Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1540 ATGTCATCTTCTTCCTCTTCGATGATGACTACCCTCCTGGTCCTACTTACTACTACTACTACTCTCTTGGCCTTGTTTCCCTCTTCCACATCAAGCCTTCCTCTCTCGTCTTTCCAGCCCAAAGACGACTTTCTGATTGATTGTGGAGCTGAAAGCACTTCCCCGCTCCCCGACGGGAGGCAGTTCAAGTCCGACCCCCAATCCAGATCCTTCCTCCAGGCCAACGACGAGTTCATGGTTTCCGCGAATAACAGCGTCAACTTCCCTTCTCCTATTTACTCCAGCTCCCGGATCTTCATCCAGGAGGCCAAGTACTCCTTCCATCTCGTCCAGCCGGGCTTCCACTGGATCCGCCTTCATTTCTATCCTATCAAGAACAACATCTTCGACCTCCAGCAGGCCACCTTCTCCGTCTACACCGACTCCTTCGTCCTCCTCCACAGCTTCAACGTCAACAACACAGACAAGCCAATCCTCAAGGAGTATCTCATCAACGCAACCGAGCCTCAGTTCACAATATCCTTCATTCCTTTGAAAAACTCCGCTGCATTCATCAATGCAATCGAGGTCGTCTCTGCTCCTGATAGCTTAATCTTCGACACAGGTTCCGGCCTCTTCCCCGTCGGGGAGGTCGGCGGCCTCACGTCCTACGGCTTCCAGCCGGTTTACCGCCTCAACAATGGCGGACCTCTCATCACGTCATCCAATGACACTCTCGGAAGAACCTGGGAGTCCGACGAGCCTTTCCTAACAAACAAAAACTTGGCCAAGAGCGCCTCGGTTGCGACCTCAGCTGTTAAGTTTCCCCCAAACAATCCTTCTATAACTCCGTTGATTGCACCTCAGACCGTGTACGCCTCCACCACTGAGATGGGTGACGCCGGTGTTAACCAACCGAATTTCAACGTGTCGTGGAAATTCGACGTGGACAATGCTTTCAGCTACCTTGTCAGGCTCCACTTCTGTGACATCGTTAGCAAAGGCCTCAACGAGCTCTACTTCAACGTGTATGTTAACGGGAAAGCAGCGATCAACAACTTGGACCTGTCGGCTCTCACTGGAGCCTTGTCAACACCGTATTACAAAGACATTGTGGTGAATGCAACGTTGATGTCTCAGGGGCTGACAATTCAGGTTGGTCCTGCGAACGCCGACGGCGTGAACGCCAACGCGATCCTGAACGGCATAGAGGTGTTGAAGATGAGCAACTCCGTGAACAGTTTGGATGGAGAGTTTGGTGTTGATGGAAGGAGTGCCAGCGGATCCAACCGCGGCACGGTGGCCGCGGTTGGATTCGCGATGATGTTTGGAGCGTTTGTTGGACTTGGCGCCATGGTGATCAAGTGGCACAAGAGACCTCAGGACTGGCAGAAGAGGAACAGCTTCTCCTCGTGGCTGCTTCCTCTGCACGCCGGCGACACGAGCTTCATGAGCAAGAACTCGATGGGGAAGAGCAACTTCTTCTCTTCATCGATGGGGCTAGGACGGTACTTCTCCTTCGCGGAGCTTCAGGAAGCAACGAAGAACTTCGACTCGAAGAACATCATTGGTGTTGGCGGATTCGGAAATGTTTACTTGGGAGTGATAGACGAGGGGACTCAAGTTGCATGGAAGAGAAAAGGGCTTATAGACAAAATAATCGATCCTCTTTTGGTTGGTTGCATCAACCCTGAGTCCATGAAGAAGTTCGCTGAGGCTGCCGAGAAGTGTTTGGCGGATCATGGCGTGGATAGACCTTCAATGGGAGATGTTCTGTGGAACTTGGAGTATGCTTTGCAGCTTCAAGAGGCATTCACACAGGGAAAAACTGAGGATGAGAACAACAGGCCATCTTCACCACCTGCACCACCAAATCCAACCACTCCTTTCGACGACCGTGCTGCAGCTCCGGCTCCGGCTCTGGCTCCAGCTCCCGTGAACAACAACAATGCTGCTGCTGCTGCACCGGATGTCAACTCTATTGATGACCATTCTGGAACTGCAATGTTTGCTCAGTTTAGCAATCTCAATGGAAGGTGA 2019 0.5206 MSSSSSSMMTTLLVLLTTTTTLLALFPSSTSSLPLSSFQPKDDFLIDCGAESTSPLPDGRQFKSDPQSRSFLQANDEFMVSANNSVNFPSPIYSSSRIFIQEAKYSFHLVQPGFHWIRLHFYPIKNNIFDLQQATFSVYTDSFVLLHSFNVNNTDKPILKEYLINATEPQFTISFIPLKNSAAFINAIEVVSAPDSLIFDTGSGLFPVGEVGGLTSYGFQPVYRLNNGGPLITSSNDTLGRTWESDEPFLTNKNLAKSASVATSAVKFPPNNPSITPLIAPQTVYASTTEMGDAGVNQPNFNVSWKFDVDNAFSYLVRLHFCDIVSKGLNELYFNVYVNGKAAINNLDLSALTGALSTPYYKDIVVNATLMSQGLTIQVGPANADGVNANAILNGIEVLKMSNSVNSLDGEFGVDGRSASGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSKNSMGKSNFFSSSMGLGRYFSFAELQEATKNFDSKNIIGVGGFGNVYLGVIDEGTQVAWKRKGLIDKIIDPLLVGCINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKTEDENNRPSSPPAPPNPTTPFDDRAAAPAPALAPAPVNNNNAAAAAPDVNSIDDHSGTAMFAQFSNLNGR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1540 672 PANTHER OS07G0166700 PROTEIN 536 629 IPR045272 GO:0004714|GO:0006468
Aed4g1540 672 Pfam Malectin-like domain 46 400 IPR024788 -
Aed4g1540 672 MobiDBLite consensus disorder prediction 600 657 - -
Aed4g1540 672 PANTHER BNAC03G60370D PROTEIN 536 629 - -
Aed4g1540 672 PANTHER BNAC03G60370D PROTEIN 28 536 - -
Aed4g1540 672 PANTHER OS07G0166700 PROTEIN 28 536 IPR045272 GO:0004714|GO:0006468
Aed4g1540 672 SUPERFAMILY Protein kinase-like (PK-like) 485 539 IPR011009 -
Aed4g1540 672 Gene3D Phosphorylase Kinase; domain 1 481 545 - -
Aed4g1540 672 Gene3D - 220 403 - -
Aed4g1540 672 Gene3D - 44 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1540 Aed-Chr4 20359680 20362271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1540 535 672 Receptor kinase-like Gene Family AT4G39110 62.329 9.93e-46 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1540 - - gmx:100793784 936.791