Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1533 ATGGCAAGTTATTATTCTCTTGCTATTATTCTTTTAGTGTGTCTTTACAGCATCTCTTTCTTGAATGCCCTAGATGGCGGTTTTAGTGTGGAAATCATCCACCGTGACTCGTCAAGATCACCATTGTATCGTCACACAGAAACTCACTTCCAACGCGTTGCAAACGCATTGCATCGTTCCGTCAATCGTGTTGATCATCATTTCAACCAACAACGACGTCTTTTTGCCTCTCCAAACGCACCCGAGTCCACTGTTGTAGCGAGTCAAGGTGAATACCTAATGAGCTATTCAGTTGGAACCCCACCATTCCAAATCATGGGTATCGTTGACACGGGCAGTGACGTCATCTGGCTGCAATGCCAGCCTTGTGAGTCTTGTTACAACCAAACCACTCCAATATTCAACCCTTCAAATTCCAAAACATACAAAACCCTACCTTGCTCTTCTCACACGTGTCGATCTGTCAAAAGCGCGTCTTGCTCCTCGGACAGTAACACGTGTGAATACACTATCAATTATGGGGATGGATCACATTCCCAAGGAGATCTTAGTGTGGAAACCCTAACTTTAGGATCCATTGATGGTTCTTCTGTCCAATTTCCCAACACTGTGATAGGATGTGGACACAACAATGTCGGAATCGGCTTTCAAGGGGAAAGCTCCGGCATAGTTGGCTTTGGAGGAGGATCTGCGTCTCTTATTTCTCAATTGAGTTCTTCAATAGGTGGAAAATTTTCCTATTGTTTGGCACCGTTGTTTACGCAATCTAACTCGTCTAGCAAACTCAGCTTCGGTGATTTTGCGACGGTGTCTGGACGTGACACCGGTTCAACCCCTATATTTCAACAAAATCCAAAAGAATTTTACTTCCTAACCTTGGAAGCATTCAGTGTGGGAGACAACAGAATAGAGTTTGGAAGCAGAAACTCTAGTGTAGACGAGGGAAACATCATAATTGACTCGGGGACAACACTCACTCTTTTGCCAGAAGATGTTTACTCAAATTTTGAATCAGCAGTGGCAGATGCAATCAAACAAGAGCGCGGCACGGATCCGAATGGACTCTTGAGCCTGTGCTACGAAGCTAACGGTGCTGATGAATTGAATGTGCCAGTAATCACGGCACATTTTAAAGGTGCAGATGTTGAGTTGAATACTGTCAACACCTTTATTGAGGTGGCCGAAAGGGTTGTGTGTTTGGCTTTCCGTTCGAGTGACATTACCATCTTTGGGAACTTGGCACAGCTAAACCTCTTGGTTGGCTATGACCTCGTTCAGAAAACTGTGTCCTTTAAGCCTACGGATTGTACCAAGGAGTAG 1320 0.4462 MASYYSLAIILLVCLYSISFLNALDGGFSVEIIHRDSSRSPLYRHTETHFQRVANALHRSVNRVDHHFNQQRRLFASPNAPESTVVASQGEYLMSYSVGTPPFQIMGIVDTGSDVIWLQCQPCESCYNQTTPIFNPSNSKTYKTLPCSSHTCRSVKSASCSSDSNTCEYTINYGDGSHSQGDLSVETLTLGSIDGSSVQFPNTVIGCGHNNVGIGFQGESSGIVGFGGGSASLISQLSSSIGGKFSYCLAPLFTQSNSSSKLSFGDFATVSGRDTGSTPIFQQNPKEFYFLTLEAFSVGDNRIEFGSRNSSVDEGNIIIDSGTTLTLLPEDVYSNFESAVADAIKQERGTDPNGLLSLCYEANGADELNVPVITAHFKGADVELNTVNTFIEVAERVVCLAFRSSDITIFGNLAQLNLLVGYDLVQKTVSFKPTDCTKE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1533 439 Pfam Xylanase inhibitor N-terminal 92 266 IPR032861 -
Aed4g1533 439 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 5 437 - -
Aed4g1533 439 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 317 328 IPR001969 GO:0004190|GO:0006508
Aed4g1533 439 Gene3D Acid Proteases 69 266 IPR021109 -
Aed4g1533 439 ProSiteProfiles Peptidase family A1 domain profile. 92 432 IPR033121 -
Aed4g1533 439 PANTHER OS07G0603500 PROTEIN-RELATED 5 437 - -
Aed4g1533 439 CDD pepsin_A_like_plant 91 436 IPR034161 -
Aed4g1533 439 Pfam Xylanase inhibitor C-terminal 289 432 IPR032799 -
Aed4g1533 439 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 107 118 IPR001969 GO:0004190|GO:0006508
Aed4g1533 439 Gene3D Acid Proteases 271 439 IPR021109 -
Aed4g1533 439 SUPERFAMILY Acid proteases 84 436 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1533 Aed-Chr4 20278344 20279663 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1533 70 438 Miscellaneous Gene Families AT1G77480 25.313 3.32e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1533 - - gmx:100789696 626.706