Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1515 ATGTCACGCTCTTCATCTCTGGCTCTTGTGTCACTGTGTCTTTACAACCTCTATTTCTTAGAGGCACTCAACGGTGGTGGGTTTAGCATTGACATCATCCACCGCGACTCGTCAAGATCACCATTGTATCGTCCCGCTGAGTCTCGATTCGACCGCGTTGCCAACGCCGTTCGTCGTTCCGTCAACCGCACCAACTGTTACAACCAATCTTTGGTCTCTACCAAACTAACCTCAGCTCGTGGCGAATACTTAATCAGCTATTCAGTTGGAACCCCACCACACCAATTCTTCGGAATTCTTGATACCGGTAGTGACATCGTTTGGCTTCAATGCATACCGTGTAAAAAGTGTTGGAACCAAACAACTCCCATATTTGAATCTTCAAAATCCAAAACATACAAAACCCTACCTTGCCCTTCTAAACAATGTAAATCTGTTCATGACACTTCTTGTTCCTCTAGGGAAAAAAATTGCGTATATAACATTGGCTATGATGATGGTTCACACTCAATAGGAGACCTTAGTTTGGAGACTCTCACTCTAGACTCCACCAAGGGCTCTTCTGTCCAATTTCCTAGAACCGTGATCGGATGTGGACGTTACAATTCTCTTCCCTTTCAAGAAAATAAAAATTCCGGCATCGTCGGCATAGGGCACGGACCGGTGTCGCTTATAAATCAATTGAGTTCTTCAGTTGGTGGGAAGTTTTCTCATTGTTTGATTCCAGCACTGTCTTCTGCATCTGGCAAATTAAACTTTGGAGATGCTGCTGTGGTTTCGGGGCCCGGAACCGTCTCAACGCCGTTGGTCTTTAAAAATGGAAAAGTGTTTTACTACCTAACCCTAGAAGCAATCAGTGTAGGAAGAAATAGAATAGAGTTTGGTGGTGGAAAGGGAAATATCGTAATTGACTCAGGTACAACACTCAGTAATTTGCCTAATGATGTTTACTCAAAGTTGGAATCAGCTATAGCAAATGCAGTGAAATTGCAGCGTGTTCGGGATCCAAATAATGTGTTGGGCCTTTGCTATAAAGCTACATCTGATAAATTGGATGCAAGTGTACCAGTGATCACAGCACATTTTAGTGGTGCAGATGTGACATTAAATGCTCTCAACGCCTTTGTTCAAGTGGCTGATGCGATTGTATGCTTTGCTTTCCAATCTGGTGATGCAGTCTTTGGGAACGTGGCTCAGCAAAACCTCTTGGTTGGCTATGACCTCCAAAAGAACACTCATTATCCCCCCACCAAATGGAAACAAAGAAAACATCATCAACGGAAACAATGTACTAAAAATACCCCCTTCTCAACATCTAGACACATTTAA 1329 0.4319 MSRSSSLALVSLCLYNLYFLEALNGGGFSIDIIHRDSSRSPLYRPAESRFDRVANAVRRSVNRTNCYNQSLVSTKLTSARGEYLISYSVGTPPHQFFGILDTGSDIVWLQCIPCKKCWNQTTPIFESSKSKTYKTLPCPSKQCKSVHDTSCSSREKNCVYNIGYDDGSHSIGDLSLETLTLDSTKGSSVQFPRTVIGCGRYNSLPFQENKNSGIVGIGHGPVSLINQLSSSVGGKFSHCLIPALSSASGKLNFGDAAVVSGPGTVSTPLVFKNGKVFYYLTLEAISVGRNRIEFGGGKGNIVIDSGTTLSNLPNDVYSKLESAIANAVKLQRVRDPNNVLGLCYKATSDKLDASVPVITAHFSGADVTLNALNAFVQVADAIVCFAFQSGDAVFGNVAQQNLLVGYDLQKNTHYPPTKWKQRKHHQRKQCTKNTPFSTSRHI 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1515 442 Pfam Xylanase inhibitor C-terminal 278 411 IPR032799 -
Aed4g1515 442 PANTHER OS07G0603500 PROTEIN-RELATED 7 412 - -
Aed4g1515 442 MobiDBLite consensus disorder prediction 414 442 - -
Aed4g1515 442 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 98 109 IPR001969 GO:0004190|GO:0006508
Aed4g1515 442 Gene3D Acid Proteases 254 434 IPR021109 -
Aed4g1515 442 SUPERFAMILY Acid proteases 79 411 IPR021109 -
Aed4g1515 442 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 301 312 IPR001969 GO:0004190|GO:0006508
Aed4g1515 442 ProSiteProfiles Peptidase family A1 domain profile. 83 416 IPR033121 -
Aed4g1515 442 Pfam Xylanase inhibitor N-terminal 83 255 IPR032861 -
Aed4g1515 442 CDD pepsin_A_like_plant 82 412 IPR034161 -
Aed4g1515 442 Gene3D Acid Proteases 59 253 IPR021109 -
Aed4g1515 442 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 7 412 - -
Aed4g1515 442 MobiDBLite consensus disorder prediction 416 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1515 Aed-Chr4 20109865 20111688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1515 48 410 Miscellaneous Gene Families AT1G77480 28.000 1.95e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1515 - - gmx:100790610 568.926