Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1514 ATGTCACGTTCTTCAACTCTTGTTCTAGTTTTATTTTGTCTTTACAACTTGTCTTTCTTAGAGTCTCTCAATAATAATGGTGGCTTCAGTGTGGAGATCATCCACCGTGACTCATCAAGATCACCATTGTTTCGTCCCACAGAAACTCAATTCCAACGAGTTGCTAACGCCGTGCGTCGTTCCGTTAATCGTGCCAATCATTTCCACACCAACAAAGCTAAGGCCATCATAACACAAGATGATGGTGAATACCTAATGAGCTATTCAGTAGGAACCCCACCATTCCAAATTTATGGTATTGTTGACACAGGGAGTGACATAATTTGGTTGCAGTGTCAACCTTGTAAAACATGTTACAACCAAACAACTCCTATATTTGATCCTTCAAAATCCAACACATACAAAACCCTTCCTTTCTCTTCTACTACATGTCAATCAGTGGAAGATACCACTTGTTCATCTGATCATCATAATGGGGAGAAAATGTGTGAATACACTATTTACTATGGAGATGAATCATACTCAAACGGAGACCTTAGTTTGGAGACTCTCACTTTAGGCTCCACCAATGGTTCTTATGTTCAATTTCCTGGAACTGTGATTGGTTGTGGACATAACAATAGTGTGTTATTTGGAGGGAAAGGCTCTAATTACACCCTAAAAATTACAACTCGAATTATACAAACTCAATTTTGGAGTGCTTCTGTTGTTTCTGGGGATGGTACTGTCTTAACTCTAATAGCCACACATAACCCTAAACAATTGAGCCATTGCTATAAAATTAGTACTTTTGATGATGAACTAGATGTGCATGTGTCGGTGATCACGGCACATTTTAGTGGTGCATATGTGAAGTTAAATGTTGTCAACACCTTTGTAGAAGTGGAAGAAGGGGTAGTATGTTTGGCTTTCATGTCTAGTAAAATTGGTACCATCTTTGGGAATTTGGCTCAGCAAAACTTCTTGGTTGGCTATGACTTACAAAAGAAAATTGTCTCCTTTAAACCTGTAGATTGCAGCAAGCAGTGA 1029 0.3878 MSRSSTLVLVLFCLYNLSFLESLNNNGGFSVEIIHRDSSRSPLFRPTETQFQRVANAVRRSVNRANHFHTNKAKAIITQDDGEYLMSYSVGTPPFQIYGIVDTGSDIIWLQCQPCKTCYNQTTPIFDPSKSNTYKTLPFSSTTCQSVEDTTCSSDHHNGEKMCEYTIYYGDESYSNGDLSLETLTLGSTNGSYVQFPGTVIGCGHNNSVLFGGKGSNYTLKITTRIIQTQFWSASVVSGDGTVLTLIATHNPKQLSHCYKISTFDDELDVHVSVITAHFSGAYVKLNVVNTFVEVEEGVVCLAFMSSKIGTIFGNLAQQNFLVGYDLQKKIVSFKPVDCSKQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1514 342 Pfam Xylanase inhibitor N-terminal 84 208 IPR032861 -
Aed4g1514 342 SUPERFAMILY Acid proteases 78 340 IPR021109 -
Aed4g1514 342 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 248 340 - -
Aed4g1514 342 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 8 216 - -
Aed4g1514 342 PANTHER OS07G0603500 PROTEIN-RELATED 248 340 - -
Aed4g1514 342 Gene3D Acid Proteases 232 342 IPR021109 -
Aed4g1514 342 Gene3D Acid Proteases 60 219 IPR021109 -
Aed4g1514 342 ProSiteProfiles Peptidase family A1 domain profile. 84 342 IPR033121 -
Aed4g1514 342 Pfam Xylanase inhibitor C-terminal 251 335 IPR032799 -
Aed4g1514 342 PANTHER OS07G0603500 PROTEIN-RELATED 8 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1514 Aed-Chr4 20094646 20105748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1514 82 208 Miscellaneous Gene Families AT1G44130 31.250 4.27e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1514 - - gmx:100790081 335.109