Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1502 ATGACTGTTGTGGAGGCTCAGTTCCATGTTTTGGCTGTTGATGACAGTGTCATTGACAGAATGTTGATCGAGAGGCTCCTAAAAACCTCCTCCTTTCATGTTACTGCAGTGGACTCTGCCACTAAGGCCTTGAAATTTCTTGGTTTGGTTGAAGATGAGTTGAGGACTTTTGACACTTCTGTTGCATCAGAAATTCATCAGGATGTAGATGTAAACCTGATTATAACAGATTACTGCATGCCAGGAATGACTGGCTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAAACATACCAGTTGTGATTATGTCCTCAGAGAATGTACCATCAAGAATCAACCGATGCTTGGAAGAGGGAGCAGAAGAATTCTTTCTGAAACCAGTTCAACAGGCAGATGTAAACAAACTCAAACCACATTTGATGAAATCAAGAGCTAAGGAAGAGAAAGACCAACCCAACTTCAATAACAAAAGGAAGGACATGGAAGAAATCCATTCCCCAAACAAAACCAGATTAAAATGTAGTAGTTAA 540 0.3944 MTVVEAQFHVLAVDDSVIDRMLIERLLKTSSFHVTAVDSATKALKFLGLVEDELRTFDTSVASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQADVNKLKPHLMKSRAKEEKDQPNFNNKRKDMEEIHSPNKTRLKCSS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1502 179 SMART REC_2 8 143 IPR001789 GO:0000160
Aed4g1502 179 MobiDBLite consensus disorder prediction 142 179 - -
Aed4g1502 179 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 175 IPR045279 GO:0009736
Aed4g1502 179 SUPERFAMILY CheY-like 8 145 IPR011006 -
Aed4g1502 179 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 5 175 - -
Aed4g1502 179 Gene3D - 9 175 - -
Aed4g1502 179 MobiDBLite consensus disorder prediction 142 172 - -
Aed4g1502 179 ProSiteProfiles Response regulatory domain profile. 9 144 IPR001789 GO:0000160
Aed4g1502 179 Pfam Response regulator receiver domain 10 136 IPR001789 GO:0000160
Aed4g1502 179 CDD REC_typeA_ARR 10 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1502 Aed-Chr4 19903990 19905545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1502 5 155 Response Regulator Gene Family AT2G41310 66.225 3.13e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed4g1502 Response_reg 2.7e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1502 K14492 - gmx:100787436 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1502 4 19903990 19905545 Aed4g1502 4 19903990 19905545 ECH
Aed4g1502 4 19903990 19905545 Aed1g0027 1 784109 789473 PCT