Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1482 ATGGAACAAGAAGAGGAGGAGAAAGAAAAAGAAGAAGAAGAAGGCAGAAACGAAGAGCAAAACAAGAAGCAGGTTCGAAAATTAGGCTTTAGTGGTGAAAGAGTGAAGAGAGATGAGTGGAGTGAAGGGGCAGTGTCGACACTTCTCGAAGCCTACGAGGCCAAATGGGTGCTCCGAAACAGAGCCAAACTCAAGGGCCACGACTGGGATGACGTGGCGCTGCACGTGTCCGCACGTGCCAACTGCACCAAAACCTCCACTCAGTGTAAGAACAAGGTCGAGTCCATGAAGAAGAGGTACAGATCGGAATCCGCAACTGCATCGTCGTCATGGCCTCTTTATTCGCGCCTCGATCTTCTTCTCAGGGGAACTGCTTCCGTTTTGTCATCGCCACCGCCGCCGCCACCACCGGAGGTGCCGGCGGTGGAGCCGTCGCATCCTCCGCCTCCGGTGGCTCCTTCGCCGCCACTTGTTGCTAATACGCAAAACTCAAATGGATCCAATGGGGTTGATGATGATAAGCTTGCAAAGGAAGATGGGTTAGGAGCTAAGTCATCTGATCATGAACATGTATCAAGCAAGAATCCATTGGACACAGATAGCAGCACTCCTGCAGTACTATACAGCAAGAAAGAAGAGTTAAGATGTAACAACAAGAGGAAGAAGAAAACAACAATTGATCAAAACAACACAGGGCGAAGTAGAAGGAAAGAGTATATGGAGATAGCAGAGAGCTTAAGATGGCTAGCAGAGGCTATGATAAGGTCAGAGCAAGCAAGAATGGACACAATGAAGGAGATTGAGAGGATGAGAGTTGAGGCTGAGGCCAAGAGAGGGGAAATGGACCTTAAGAGAACTGAAATAATTGCCAACACACAGTTAGAGATTGCTAGGATTTTTGCGAGTGTCAACAACAACAATAGTAAAGGTGTTGTTGATTCATCTCTACGAATTGGAAGAAGTTAA 966 0.4762 MEQEEEEKEKEEEEGRNEEQNKKQVRKLGFSGERVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWDDVALHVSARANCTKTSTQCKNKVESMKKRYRSESATASSSWPLYSRLDLLLRGTASVLSSPPPPPPPEVPAVEPSHPPPPVAPSPPLVANTQNSNGSNGVDDDKLAKEDGLGAKSSDHEHVSSKNPLDTDSSTPAVLYSKKEELRCNNKRKKKTTIDQNNTGRSRRKEYMEIAESLRWLAEAMIRSEQARMDTMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNNNSKGVVDSSLRIGRS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1482 321 MobiDBLite consensus disorder prediction 128 156 - -
Aed4g1482 321 Gene3D - 40 102 - -
Aed4g1482 321 MobiDBLite consensus disorder prediction 171 195 - -
Aed4g1482 321 MobiDBLite consensus disorder prediction 126 211 - -
Aed4g1482 321 Pfam Myb/SANT-like DNA-binding domain 37 119 IPR044822 -
Aed4g1482 321 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 316 IPR044823 -
Aed4g1482 321 Coils Coil 1 28 - -
Aed4g1482 321 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 10 316 - -
Aed4g1482 321 MobiDBLite consensus disorder prediction 1 28 - -
Aed4g1482 321 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1482 Aed-Chr4 19545700 19549934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1482 31 127 Trihelix Transcription Factor Family AT3G14180 32.381 2.84e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed4g1482 Myb_DNA-bind_4 1.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1482 - - gmx:100784245 410.609