Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1481 ATGGAAGAGACTCGTAATCACAATCCCCGCACCATCCGCACCCTTGTCTCGAAGCTCAGCTCCGTCTCCGAACCCGCCCGCATCGACGCCCTAACCCAACTCCGCCTCATGTCCAAACAAAACCCCGAAACCCGCCCCATCATCGCCGAAGCAGGTGCAATCCCCTACATCGCAGAAACCCTCTACTCCTCCTCCCACCCCTCCCAGGAAAACGCCGCAGCCACACTCCTCAACTTATCCATCACAGAGAAGGAGCCTCTCATGTCGACACGTGGCGTCCTTGACGCCATCGCGCACGTCATCTCTCACCACAGCACGACCTCCTCCCCCGCGGCGGTTCAGTCCGCCGCCGCCACGATCCACAGCCTCCTCGCCTCCGTCGACTCCTACCGCCCGGTAGTCGGATCCAAACGCGAGATCGTCTACTCACTCACCGACATCCTCCGCTGCCACGTGTCGTCACCTCCTCGCACGATCAAGGATTCCTTGAAAGCGCTATTCGCAATCGCGCTTCATCCTCTCAACCGCACCACGATGATCAACCTCGGCGTCGTTCCCGCGCTTTTTTCCCTTGTCGTCAAGGACGGCAGGGTGGGGATTGTGGAAGACGCGACCGCCGTGATCGCGCAGGTCGCCGGCTGCGAGGACGCCGCGGAGGCCTTCCAAAAGGCCTCCAGCGGCGTCGGCGTCCTCGCGGACCTCCTCGACCTCACCACCGCCGCCAGCATGCGCACCAAGGAGAACGCCGTCTCGGCGCTGCTCAATCTGGTGCGGTGCGGCGGCGACGGGGTCGCCGCCGACGTCCGCGACGTCGTGGCGTTCGGAGCGCTGGACGGCATCGCGGACGTAAGGGACGGCGGCAGCGGGAAGGGGAAGGCCAAGGCCGCCGATTTGTTGAAGGTTCTGCTCGGTGAGAGGAATTCCGATGACGGTGATGGCGATGCTGCTGTACATGTGTTGAATAACGGTGACACGTGTTCTTCGTTTGGTTCCTCTCGGAATCATGATTCGGATTGA 1017 0.6234 MEETRNHNPRTIRTLVSKLSSVSEPARIDALTQLRLMSKQNPETRPIIAEAGAIPYIAETLYSSSHPSQENAAATLLNLSITEKEPLMSTRGVLDAIAHVISHHSTTSSPAAVQSAAATIHSLLASVDSYRPVVGSKREIVYSLTDILRCHVSSPPRTIKDSLKALFAIALHPLNRTTMINLGVVPALFSLVVKDGRVGIVEDATAVIAQVAGCEDAAEAFQKASSGVGVLADLLDLTTAASMRTKENAVSALLNLVRCGGDGVAADVRDVVAFGALDGIADVRDGGSGKGKAKAADLLKVLLGERNSDDGDGDAAVHVLNNGDTCSSFGSSRNHDSD 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1481 338 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 309 - -
Aed4g1481 338 SUPERFAMILY ARM repeat 10 302 IPR016024 -
Aed4g1481 338 Gene3D - 2 283 IPR011989 -
Aed4g1481 338 PANTHER U BOX DOMAIN-CONTAINING 7 309 - -
Aed4g1481 338 SMART arm_5 214 258 IPR000225 GO:0005515
Aed4g1481 338 SMART arm_5 172 213 IPR000225 GO:0005515
Aed4g1481 338 SMART arm_5 41 81 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1481 Aed-Chr4 19537901 19538917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1481 12 302 U-box Gene Family AT1G23030 32.095 2.53e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1481 - - gmx:100787115 509.99