Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1463 ATGGCATCTTCTTCAAATTCACCATGTGCAGCATGCAAGTTCTTGCGTCGCAAATGCCAACCCGAGTGTGCATTTGCACCATACTTTCCTCCAGACCAGCCTCAAAAGTTTGCAAATGTCCATAGAATCTTTGGGGCAAGCAATGTCACAAAGCTTCTCAATGATTTGCACCCTCACCAACGTGAAGATGCTGTCAATTCCCTTGCTTATGAAGCCGAGATGAGGCTCCGTGACCCCGTCTACGGCTGTGTAGGAGTCATATCGCTCCTACAGCACCAACTTCGCCAGCTCCAGATGGACCTGTATTGCGCGAAGTCAGAGCTCTCAAGGTATCAACAAAACCTGAGCTCTTTGGCTTCCGAGGGGGCCACGGCCTCCTACCACCATCACCACCAAACGACGAACAACATATCATCGTCTGGCAGCGGCGGTGGTGGTGGGACCGGCTTTGGCCGTGACCACCACTATCATCACTATCATCACCACCACCAGTTCTTTCCGAGGGAGAACCTCCAACAACAAGTGGTGAGAGGCTTTGATGCAGCTTCCAACAACTATGATGCAAGCCTCCTTGCCATGAACATATCCGCCAGCTTAGGGCAACTCAACCAGCTTCAGCAGCAGAGTGCCGCGGGCGGAGGTGACGACCGCAACCGCTCCTAG 663 0.5294 MASSSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQQNLSSLASEGATASYHHHHQTTNNISSSGSGGGGGTGFGRDHHYHHYHHHHQFFPRENLQQQVVRGFDAASNNYDASLLAMNISASLGQLNQLQQQSAAGGGDDRNRS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1463 220 MobiDBLite consensus disorder prediction 122 154 - -
Aed4g1463 220 Coils Coil 94 114 - -
Aed4g1463 220 Pfam Lateral organ boundaries (LOB) domain 8 104 IPR004883 -
Aed4g1463 220 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Aed4g1463 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 189 - -
Aed4g1463 220 MobiDBLite consensus disorder prediction 122 145 - -
Aed4g1463 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1463 Aed-Chr4 19152741 19153403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1463 2 217 AS2 family AT1G65620 64.516 4.74e-78 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed4g1463 LOB 3.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1463 - - gmx:100806890 333.183