Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1460 ATGGTTCCATCATCACTTTGTGCTAATGGTTGTGGGTTCTATGGTTGTGCTGCCAACAAGAACCTTTGTTCAAAGTGTTACAAAGATTATCTCAAAGAAAATGCCGTCACCAAATCAAATGAGTGTGATGAAACCAAAAACAACTTGAATGGCACAAATTCTGTTCTTGATCAATCATCTGCACATGCCTCTGATTCTGAAGGTGGTTCTATCACTGATGCTATGACTGCTGTTGCTCTTAGCAGTACCAACAAGAGAAAGAGGTGCAAAAGCTGCAACAAAAAGGTTGGACTTTTAGGATTTGAATGTCGTTGTGGGGATGTGTTTTGTGGAACACATAGATACCCTGAAAAGCATGCATGTGATGTGGATTTTAAGGAAATTGGTCGTCAATGTTTGGCTAAACAAAATCCTTTATGTAATGGTGATAAGTTAGAACATAGGATTTAG 450 0.3867 MVPSSLCANGCGFYGCAANKNLCSKCYKDYLKENAVTKSNECDETKNNLNGTNSVLDQSSAHASDSEGGSITDAMTAVALSSTNKRKRCKSCNKKVGLLGFECRCGDVFCGTHRYPEKHACDVDFKEIGRQCLAKQNPLCNGDKLEHRI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1460 149 SUPERFAMILY AN1-like Zinc finger 82 143 IPR035896 -
Aed4g1460 149 SMART A20_3 4 28 IPR002653 GO:0003677|GO:0008270
Aed4g1460 149 ProSiteProfiles Zinc finger AN1-type profile. 83 129 IPR000058 GO:0008270
Aed4g1460 149 Pfam AN1-like Zinc finger 89 123 IPR000058 GO:0008270
Aed4g1460 149 Pfam A20-like zinc finger 5 28 IPR002653 GO:0003677|GO:0008270
Aed4g1460 149 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 41 - -
Aed4g1460 149 SMART AN1_Zf_4 89 126 IPR000058 GO:0008270
Aed4g1460 149 ProSiteProfiles Zinc finger A20-type profile. 1 35 IPR002653 GO:0003677|GO:0008270
Aed4g1460 149 PANTHER AN1-TYPE ZINC FINGER PROTEIN 5 149 - -
Aed4g1460 149 Gene3D - 3 54 - -
Aed4g1460 149 Gene3D - 62 143 IPR035896 -
Aed4g1460 149 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 5 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1460 Aed-Chr4 19136142 19136591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1460 6 146 C2H2 Transcription Factor Family AT3G52800 34.194 1.07e-26 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1460 - - gmx:102663114 200.675