Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1413 ATGGGATTTCGCAACACAGCAGGTCCAGAGAAGCACCAAGCAGTGGCACTGATGACAAGTGCAGATCAAGCAGTTTACTACAAGTGCCAAATTGATGCATTTCAGGACTCTCTCTATGCTCATTCCAACCGCCAATTCTACAGAGAATGTGACATCTATGGCACTGTTGATTTCATTTTTGGCAACTCAGCAGTGATTCTCCAAAACTGCAACATCATGCCAAGGGTGCCAATGCAGGGGCAGCAGAACACCATAACAGCACAGGGAAAAACTGACCCCAACATGAACACTGGAATCTCAATTCAGCATTGCAACATTGCACCCTTTGGGGACCTTAGCTCTGTGAAAACATACCTTGGAAGACCCTGGAAGAATTACTCGACCACGGTGTTTATGCAATCCACATTGGGGGGTTTCATTCACCCAAATGGATGGTTACCTTGGGTAGGGGACTCGGCACCTGATACCATATTTTATGCAGAGTTTCAGAATGTTGGACCTGGTGCTTCCACAAAGGATAGGGTGAAGTGGAAGGGTGTGAAAAACATTACAAAGAAACAAGCTACCATGTTCACTGTCAAGGCTTTTCTTTCTGGGGAGAAATGGATTTCAGCTTCTGGCTTCTTTTTGAAGATATTTGAACCTACAAGTACCCATTTTGATTCTATGTTTGCACCAATCTCTTTATATCTCTGCCTTAAGTTCTTTTTCTTAAACGTGCGTGCAGTTCTGATCACATTCAAAATGGATAAAGCTGATAGACAAATCTCCAAGTTAAAGACTCACACAGTCACGCACACTAGACTTATATCCTCTGTTCTGTTCTGTTTCTATACAAGACCTTCATGCTTTATGAAGCTCATGAAGTTGGTGAAACTAACTAGCTTGCATCAGGGATATCATTTGGGGTATCTGGAGTGGTTATTTGCCATTGCTTTTGTTGGAGGAATAGCTGCTCCTCTGAACTATCGTTGGGGACCTCAGTCATACTTGATTTTGAAATTTGTGAGATGTGTTCTGCTTTTGCTTCGCAACCATTTCATCTTTCTTTTCAAACTGAACACACAGAAGAATACTGTTAGTGTTATGATCAATGCAGATTTTGTGTCATTTTGTGGTACTCTTAGTGTTCTTAATGGGTCAAGAGTGGTAGAGCTGCAGATTTTGAGCTCTGCCAATGGGTATCTAAATCCATTCCTATACATTCGATTATTGGTATCAGAGCTTGTGGTTATCATATCATTCATTGGACCGGGAGGAATATATTCCCAAGTGGATTACGGCTTGCATCATCTACGAATGAAAGATCTTACCTTGCAAATAAGGACATCATCAAATTCTTCTCCTAAAAGGATAAGCAAGGAGTTTGATTGGTTTTGTCAGCCTGTAATCCGTGGTGAAAATATGTATTCGATTTTGAAGGCAGAAGAAGCATTGAAGACCAATGTACTCATCAATCTGAAAAACTCCAAAGAGTTCACAAGTAACAGTCTTGCCATTATTACTTGGCTCAACAAAGCTGCAAGCACAGTGAACCTGAGGCGCTTGTTGAGTACAAAAGAAGAACCAAAGTGA 1575 0.4133 MGFRNTAGPEKHQAVALMTSADQAVYYKCQIDAFQDSLYAHSNRQFYRECDIYGTVDFIFGNSAVILQNCNIMPRVPMQGQQNTITAQGKTDPNMNTGISIQHCNIAPFGDLSSVKTYLGRPWKNYSTTVFMQSTLGGFIHPNGWLPWVGDSAPDTIFYAEFQNVGPGASTKDRVKWKGVKNITKKQATMFTVKAFLSGEKWISASGFFLKIFEPTSTHFDSMFAPISLYLCLKFFFLNVRAVLITFKMDKADRQISKLKTHTVTHTRLISSVLFCFYTRPSCFMKLMKLVKLTSLHQGYHLGYLEWLFAIAFVGGIAAPLNYRWGPQSYLILKFVRCVLLLLRNHFIFLFKLNTQKNTVSVMINADFVSFCGTLSVLNGSRVVELQILSSANGYLNPFLYIRLLVSELVVIISFIGPGGIYSQVDYGLHHLRMKDLTLQIRTSSNSSPKRISKEFDWFCQPVIRGENMYSILKAEEALKTNVLINLKNSKEFTSNSLAIITWLNKAASTVNLRRLLSTKEEPK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1413 524 PANTHER PECTINESTERASE 1 210 - -
Aed4g1413 524 PANTHER PECTINESTERASE 479 514 - -
Aed4g1413 524 Pfam Pectinesterase 1 199 IPR000070 GO:0030599|GO:0042545
Aed4g1413 524 Gene3D - 1 211 IPR012334 -
Aed4g1413 524 PANTHER PECTINESTERASE 1 210 - -
Aed4g1413 524 PANTHER PECTINESTERASE 479 514 - -
Aed4g1413 524 SUPERFAMILY Pectin lyase-like 2 208 IPR011050 -
Aed4g1413 524 ProSitePatterns Pectinesterase signature 2. 52 61 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1413 Aed-Chr4 18541607 18547127 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1413 1 206 Carbohydrate Esterase AT3G10710 68.447 1.77e-105 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1413 - - gmx:100808802 412.149