Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1404 ATGGGGACCCAAACTATGGGAACTCATGGTGGTGGTGGAGACAGTAATGGGAAACAGTCACCACTCCAGCCTCTGGTGCGGCAAAACTCAATGTACAATCTCACACTTGATGAGGTTCAAAATCAATTAGATTTGGGGAAGCCGCTAAGTAGTATGAACATTGACGAGCTTCTAAAAAACGTGTGGACTGTCGAGGAAAGCCAGACTCTTGGTATGGAAAATGAGGGCACTGCACAAGCTAGTCAAGCTGCTCTGCAGCGTCAGGCTAGTCTGTCGTTAACTGGTGCACTAAGCAAGAAGACTGTAGATGAGGTTTGGAGAGATATCCAACAAAACAAAATCATTGAAGAGAAGAAGTTCCAAGATCGACTTCCTACTTTGGGAGAAATGACATTGGAGGATTTCTTGGTGAAAGCAGGTGTAGTTGCGGATGCATCTTCTAATAGAAAGAATACCGGTACTATAGCTGGGGTCGATTCAAACATGGCAGTACCACAGTTTCCTCCACAAGGACAGTGGATACAGTATCCACAAACACAATATCAGCATCCACCACAAAGTTTAATGGGGATGTATATGCCTGGCCAAGGTATGGTACAACCATTGCACATGGGAGTTGGAGCTCCGATGGATGTTTCATTTGCAGATAGTCAGGTGGCATTGCCACCACCTCTGATGGGAACAGTGTCGGATATGCAGAATCCTGGAAGAAAAATGGGCACTCCTGATGACATGATAGAGAAGACTGTTGAGAGGAGACAGAAAAGGATGATAAAAAATCGAGAATCTGCTGCACGTTCAAGACAAAGGAAACAGGCATACACAACTGAATTGGAGAATAAAGTATCGCGCCTGGAAGAGGAAAATGAAAGGCTGAAGAAAGAAAAGAAGATAGAGCTGATGTTGCCATGTGCACCCCCTCCCGAGCCGAAATATCAACTTCGCCGAATAGCATCATCTCCATTCTGA 969 0.451 MGTQTMGTHGGGGDSNGKQSPLQPLVRQNSMYNLTLDEVQNQLDLGKPLSSMNIDELLKNVWTVEESQTLGMENEGTAQASQAALQRQASLSLTGALSKKTVDEVWRDIQQNKIIEEKKFQDRLPTLGEMTLEDFLVKAGVVADASSNRKNTGTIAGVDSNMAVPQFPPQGQWIQYPQTQYQHPPQSLMGMYMPGQGMVQPLHMGVGAPMDVSFADSQVALPPPLMGTVSDMQNPGRKMGTPDDMIEKTVERRQKRMIKNRESAARSRQRKQAYTTELENKVSRLEEENERLKKEKKIELMLPCAPPPEPKYQLRRIASSPF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1404 322 MobiDBLite consensus disorder prediction 257 322 - -
Aed4g1404 322 Coils Coil 268 302 - -
Aed4g1404 322 MobiDBLite consensus disorder prediction 257 300 - -
Aed4g1404 322 MobiDBLite consensus disorder prediction 1 23 - -
Aed4g1404 322 SMART brlzneu 248 316 IPR004827 GO:0003700|GO:0006355
Aed4g1404 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 295 IPR004827 GO:0003700|GO:0006355
Aed4g1404 322 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 19 320 - -
Aed4g1404 322 SUPERFAMILY Leucine zipper domain 252 297 IPR046347 GO:0003700|GO:0006355
Aed4g1404 322 Pfam bZIP transcription factor 252 295 IPR004827 GO:0003700|GO:0006355
Aed4g1404 322 CDD bZIP_plant_BZIP46 252 305 - -
Aed4g1404 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 320 IPR043452 GO:0003700|GO:0045893
Aed4g1404 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 255 270 IPR004827 GO:0003700|GO:0006355
Aed4g1404 322 Gene3D - 250 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1404 Aed-Chr4 18379466 18384732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1404 18 322 bZIP Transcription Factor Family AT3G56850 51.603 9.53e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed4g1404 bZIP_1 6.4e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1404 K14432 - gmx:100101875 507.294