LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g1386	ATGGCAGAAGTCATGAACGTGCCTCCCGAATCCCTCGACAAATCCCCTTCCTCCTCCGCTCCCCCTGCGCCTCCACCGCTGCCACCTTCCTCCTCCGCCGTGGACGACCTCCCACCTCAATCCGCCGCCGCCGTCCCGGACGACCTCCCGCCTCCATCATCCTCCGCCGCCGCTGCGGACGACCACCCGCCTCCATCATCCTCCGCCGCCGCTGCGGACGACCTCCCGCCTCCATCATCATCCGCCGCCGCCGCGGACGACCTACCACTTCCGCCTCCTGCGCCTCATTACCCACCCCGGCGAAGGGACCGTAGAGATGAGAGAGATTTCGACCGCCCTCCCAACCGCCGCGGAGATTACTACGACCGGAGCTCACCGCCGCCGCGTGACAGAGACAGGGACAGGGATAGGGACTTCAAGCGCCGCCGCAGCCCCAGCCCTCCTCCCCACCGCGACCGGCGCTATTCCTCACCGCCGCCGCGGCGCTCTCCTCCGCCTTACAAGCGGTCGCGCAGGGGGAGCCCTCGCGGTGGGTATGGACCTGATGATAGCAGGCATGGATATGACTATTATGGTGGTTATGAACGGGGAATGGGTGGGAGAGGTGGTTATGCAGATGAGAAGTCCTATGGCAGGTTTGGACCACGTTCTGCAGGGGGGTATCAAAATGGGATTTCTGATGTAGAATCTAATCGGGGTTATGGAGACATGCCAAGTGGTGGTGCACACAGAGAGGGGTTGATGTCCTATAAGCAGTTCATTCAGGAGCTTGAGGATGATATACTACCAGCTGAAGCGGAGCGTAGGTATCAAGAATACAAATCAGAGTATATCTCGACTCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGGTTACAGCCATTGAAAGGAGGAATGAAAATGCTCGACAGCTAGCAAAAGATTTTTTGCTTGATTTGCAGAGTGGAACATTAGAACTAAATCCTGGTTTAAATGCCTCTATAACAAGTAAACCAGGGCAAGCTAGTGAGCCAAATTCAGAGGAGGAAGCAGACGCTGAAGGTAAACGAAGAAGGCAGGGTAGGGGATCCAATAAAGAAAATGATTTGTCAGCTGCTCCAAAGGCTCACCCTATCAGTACTGAACCAAGACGGATACAGGCAGATGTTCAACAAGCTCAGGCCCTTGTTCGCAAGCTTGACACAGAAAAGGGTATTGAAGACAATGTTTTATGGAGCAGTGATCACAATAAAAATGATGATAAGGCTCACAGTGGATCTGTGGGTCCCATAGTAATAATACGGGGCCTAACATCTGTTAAGGGTTTAGAAGGTGATGAGCTTCTGGATACACTCATTACATATCTTTGGCGGATTCATGGTGTGGATTATTATGGATTGATTGAGACTAATGAAGCTAAGGGCTTTAGGCATGTGAGACCGGAAGGGACATCGCATGAAGTAGTAGCAGGGAAATCAGGGTCTGACTGGGAGAAGAAACTTGACTTATTTTGGCAAGGAAGGCTGAATGGTCAGGATCCCTTGGAAGTAATGACTGGTAAGGAGAAGATAGATGCTGCAGCAGTGGAAGTATTGGATCCATATGTTCGAAAAATTAGGGATGAAAAGTATGGATGGAAATATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCTTCTGAATTTGTGCACAAACATCTGAAGCTCAAACACCCAGAGCTTATTGTGGAACAGACTACAAAAGTACGAGAGGATCTCTATTTTCAAAATTACATGAATGATAAAGATGCTCCTGGTGGGACACCCATCATGCAGCAACCTCAGAAGGGCAGGCCTTTAAAGCGAAGATTAGGTCTTGAGGGCCGATTGAGAGATGATCGTGGTAATCGGCGAGACCATGACCAAAATGATAGAATGAATGGAGATAGGCCTGATAATTCCCCATCCCATGAAGCCATGATGGGAAACCGTGATGAAACAATGTATGATTCATTTGCAGGACCAGGTGTACCTCCATTTGCCTCAGATATACCCCCACCAGTGTTGATGCCCGTCCCTGGTGCTGGACCTTTGGGACCCTTTGTTCCTGCTCCCCCGGAAGTTGCAATGCAGATGTTAAGAGATCAAGGAGGACCATCATATGATGCCTCTGGAAGAAAGATGCGCTCTGGTCCTCCTATGGGTGGAGGACCGTCAATAATTGCTGTTCCTCCAAATTTTAGACCAGATCCTCGGCGAATGCGAAGTTATCAAGATCTGGATGCCCCAGAGGACGAGGTCACTGTGATAGACTATCGGAGTTTGTAG	2331	0.5041	MAEVMNVPPESLDKSPSSSAPPAPPPLPPSSSAVDDLPPQSAAAVPDDLPPPSSSAAAADDHPPPSSSAAAADDLPPPSSSAAAADDLPLPPPAPHYPPRRRDRRDERDFDRPPNRRGDYYDRSSPPPRDRDRDRDRDFKRRRSPSPPPHRDRRYSSPPPRRSPPPYKRSRRGSPRGGYGPDDSRHGYDYYGGYERGMGGRGGYADEKSYGRFGPRSAGGYQNGISDVESNRGYGDMPSGGAHREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLVTAIERRNENARQLAKDFLLDLQSGTLELNPGLNASITSKPGQASEPNSEEEADAEGKRRRQGRGSNKENDLSAAPKAHPISTEPRRIQADVQQAQALVRKLDTEKGIEDNVLWSSDHNKNDDKAHSGSVGPIVIIRGLTSVKGLEGDELLDTLITYLWRIHGVDYYGLIETNEAKGFRHVRPEGTSHEVVAGKSGSDWEKKLDLFWQGRLNGQDPLEVMTGKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELIVEQTTKVREDLYFQNYMNDKDAPGGTPIMQQPQKGRPLKRRLGLEGRLRDDRGNRRDHDQNDRMNGDRPDNSPSHEAMMGNRDETMYDSFAGPGVPPFASDIPPPVLMPVPGAGPLGPFVPAPPEVAMQMLRDQGGPSYDASGRKMRSGPPMGGGPSIIAVPPNFRPDPRRMRSYQDLDAPEDEVTVIDYRSL	776

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g1386	776	MobiDBLite	consensus disorder prediction	18	33	-	-
	Aed4g1386	776	MobiDBLite	consensus disorder prediction	621	653	-	-
	Aed4g1386	776	MobiDBLite	consensus disorder prediction	335	350	-	-
	Aed4g1386	776	Pfam	SERRATE/Ars2, N-terminal domain	251	332	IPR021933	-
	Aed4g1386	776	PANTHER	SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN	87	776	-	-
	Aed4g1386	776	MobiDBLite	consensus disorder prediction	601	662	-	-
	Aed4g1386	776	MobiDBLite	consensus disorder prediction	355	371	-	-
	Aed4g1386	776	Pfam	Arsenite-resistance protein 2	497	677	IPR007042	-
	Aed4g1386	776	ProSitePatterns	Zinc finger C2H2 type domain signature.	556	579	IPR013087	-
	Aed4g1386	776	MobiDBLite	consensus disorder prediction	335	392	-	-
	Aed4g1386	776	MobiDBLite	consensus disorder prediction	1	241	-	-
	Aed4g1386	776	MobiDBLite	consensus disorder prediction	717	762	-	-
	Aed4g1386	776	PANTHER	ARSENITE-RESISTANCE PROTEIN 2	87	776	IPR039727	GO:0006397
	Aed4g1386	776	MobiDBLite	consensus disorder prediction	97	145	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed4g1386	Aed-Chr4	18082606	18090259	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed4g1386	126	776	C2H2 Transcription Factor Family	AT2G27100	61.351	0.0	747