Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1382 ATGGACCCGAAAGCCCCATATGAGAATTCTTCCAATTTTGATCCTTTTGGGTTCAATTCATCATCACATAGAAGTGCCCTGTCCCTTCAGTCTAGGAGTTTTGGTAGGGATGAAAACTCCACCACCCGTGAAGTGAGTCATGGCCACTTAGGATCCAAGCCTGCGAGGTACGGGTCAACAAATTCAGAAGGTCTCAGCTTTTCTCTGAAGGAAATCAGTGATGAGGATGCACGGTTGGTGTTTGTTGATGATCCTGAGAGAACAAATGAAAGGCTCGAATTCGTGGGGAATTCGATTCGGACGGGGAAGTACTCAATCTTCACTTTTCTCCCAAGGAATCTGTTTGAACAGTTTCATAGAGTTGCTTACATTTACTTCCTTGCAATTGCTGTTCTCAATCAGCTACCTCAGTTGGCTGTTTTTGGGAGGGGTGTTTCGATTATGCCATTGGCCTTTGTGCTTCTTGTCACTGCTGTGAAGGATGCATTTGAGGACTGGAGGAGGCACAGGTCAGACAGAATTGAGAACAACAGGTTAGCATTGGTTTTTGTTAATGGAAAGTTTCAAAAGAAGAGTTGGAAGGATGTTAGGGTTGGTGAGGTCATTAAAATCAGTGCAAATGAAACAATTCCTTGTGATGTTGTGTTGTTATCAACTAGTGACCCTACTGGGGTTGCTTATGTGCAGACTATTAATCTTGATGGAGAGTCTAATTTGAAGACTAGGTATGCTAAACAAGAGACTCAATCAAAGTTGCTTGAGAAGGAGGGGTTGAATGGATTGATTAAGTGTGAGAAACCCAATAGGAATATATATGGATTTCAGGGTAATATGGAACTTGATGGAAAGAGGTTGTCTCTTGGATCCTCCAACATTGTCCTTAGAGGCTGTCAGCTCAAGAATACCAATTGGGCACTTGGTGTTGCTGTGTATTGTGGCGGCGAGACCAAAGCTATGCTCAACAGCTCTGGAGCTCCATCGAAAAGGAGCCTTCTCGAGACTCGCATGAACTCCGAGATCATCATGCTTTCTTTCTTTCTTATAGCTTTGTGTACAGTCACCTCTGTTTGTGTTGGTGTTTGGTTAAGGCGCCACAAGGATGTGTTGAATCTCTTGCCGTATTATAGGAAACTGGATGTTTCCGATGGGGGAGAGAAAAACTATAAATATTATGGATGGGTGCTGGAAATTGTTTTCACTTTCCTCATGTCGGTTATAGTATTCCAGGTTATGATCCCCATATCCTTGTACATTTCCATGGAGCTTGTCCGTGTTGGTCAGGCATACTTCATGATCAGAGACTCAAGAATGTATGATAAGGTGACAGATTCAGGATTTCAGTGCAGGGCTTTGAATATTAATGAAGATTTGGGCCAAGTTAAATATGTCTTTTCTGACAAAACTGGTACACTGACTGAGAACAAGATGGAATTTAAATGTGCGAGCATCCTGGGGTTTGATTACAGTTCTGAAAAGGACAGTCTTGAGAATGAGCAAGTTGAATACTCTGTTCAAGTGGATGGGAAGGTCTTTATGCCAAAGATGATGGTGAAAGTTAACCAAGAGCTTTTGCAATTATCAAAAAGTGGATTCGCAAATAGAGAGGGGAAACAGATTTATGATTTCTTTCTAGCATTGGCAGCCTGCAACACCATTGTGCCTCTTGTTGTTGACACATCTGACCCTATGGTCAAGCTAATAGATTACCAAGGGGAATCACCAGATGAACAAGCGTTGACTTATGCTGCTGCTGCCTATGGTTTCATGCTTGTTGAACGGACCTCAGGTCACATAGTCGTTGACATTCATGGAGAAAAAAAGTTAAGTCTTGCATGTCTTATTTGTGTTCCATCTTCCCTGGATATGTAG 1869 0.4232 MDPKAPYENSSNFDPFGFNSSSHRSALSLQSRSFGRDENSTTREVSHGHLGSKPARYGSTNSEGLSFSLKEISDEDARLVFVDDPERTNERLEFVGNSIRTGKYSIFTFLPRNLFEQFHRVAYIYFLAIAVLNQLPQLAVFGRGVSIMPLAFVLLVTAVKDAFEDWRRHRSDRIENNRLALVFVNGKFQKKSWKDVRVGEVIKISANETIPCDVVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETQSKLLEKEGLNGLIKCEKPNRNIYGFQGNMELDGKRLSLGSSNIVLRGCQLKNTNWALGVAVYCGGETKAMLNSSGAPSKRSLLETRMNSEIIMLSFFLIALCTVTSVCVGVWLRRHKDVLNLLPYYRKLDVSDGGEKNYKYYGWVLEIVFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIRDSRMYDKVTDSGFQCRALNINEDLGQVKYVFSDKTGTLTENKMEFKCASILGFDYSSEKDSLENEQVEYSVQVDGKVFMPKMMVKVNQELLQLSKSGFANREGKQIYDFFLALAACNTIVPLVVDTSDPMVKLIDYQGESPDEQALTYAAAAYGFMLVERTSGHIVVDIHGEKKLSLACLICVPSSLDM 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1382 622 Gene3D - 444 460 - -
Aed4g1382 622 SUPERFAMILY HAD-like 451 502 IPR036412 -
Aed4g1382 622 ProSitePatterns E1-E2 ATPases phosphorylation site. 466 472 IPR018303 -
Aed4g1382 622 Coils Coil 236 256 - -
Aed4g1382 622 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 607 - -
Aed4g1382 622 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 145 255 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed4g1382 622 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 396 489 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed4g1382 622 Pfam Phospholipid-translocating ATPase N-terminal 81 146 IPR032631 -
Aed4g1382 622 MobiDBLite consensus disorder prediction 29 59 - -
Aed4g1382 622 SUPERFAMILY Calcium ATPase, transduction domain A 177 318 IPR008250 -
Aed4g1382 622 SUPERFAMILY Calcium ATPase, transmembrane domain M 91 541 IPR023298 -
Aed4g1382 622 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 94 604 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aed4g1382 622 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 607 - -
Aed4g1382 622 Pfam E1-E2 ATPase 180 421 - -
Aed4g1382 622 Gene3D - 461 473 IPR023214 -
Aed4g1382 622 Gene3D - 474 483 IPR023299 GO:0000166
Aed4g1382 622 Gene3D - 152 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1382 Aed-Chr4 17856738 17863583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1382 1 607 Primary Pumps ATPases AT5G04930 67.430 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1382 K14802 - gmx:100784988 1067.76