Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1355 ATGGATGCACAAAGCTCTCAGCAATCACAAGTTATTGAGATCAGTGGAGATTTTTCTGATGGTGGAAGGAAGATCTGTGGGGAAGCACCATGTGGGTTTGTAGATGCTGGATCCATCTCTAAGGATTCTGAAGAAAGATCGACTTCTATGCGAAAACTTTTCATGGCAGTGGTCCTTTGTGTTATATTCATGGCCGTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATATTGACTGATGCTGCACATTTGCTTTCAGATGTTGCCGCCTTTGCTATCTCCTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACACCTCGCCAATCATATGGATTTTCCGAATAG 354 0.435 MDAQSSQQSQVIEISGDFSDGGRKICGEAPCGFVDAGSISKDSEERSTSMRKLFMAVVLCVIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFSE 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1355 117 Gene3D Cation efflux protein transmembrane domain 49 117 IPR027469 -
Aed4g1355 117 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 115 - -
Aed4g1355 117 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 115 IPR027469 -
Aed4g1355 117 TIGRFAM CDF: cation diffusion facilitator family transporter 50 116 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Aed4g1355 117 PANTHER METAL TOLERANCE PROTEIN A1 1 115 - -
Aed4g1355 117 Pfam Cation efflux family 53 116 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1355 Aed-Chr4 16998244 16998597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1355 1 115 Inorganic Solute Cotransporters AT2G46800 69.167 4.60e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1355 K14689 - gmx:100790458 211.075