Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1354 ATGGCTTTGTTATTGGGTCATGATCATGGCCACAGACATGATGGTCATGGTCACAGTCACGGACATGATGGTCATGGCCACGGTCATGTATTTACAGTGTCTAGCCATCATGATTCAAAGCATACAAAAGATGATCACCATCACACACATGATGAAGACCATCCAAAAGATGCTCACCATCATACTGATGAAGACCATCATGCTCACAAAGAGGTTACTGAACCTCTTCTTGGTGAATCAAAAGATGGAACTAAGAAGAAGCAATGGAACGTAAATATAAGGGGGGCTTATCTCCATGTTCTTGGGGACTCTATCCAGAGCATTGGGGTAATGATTGGAGGAGCAGCCATATGGTATAACCCTCGGTGGCAAATAGTTGATTTAGTCTGCACCCTAATCTTTTCAGTAATTGTTTTGGGGACTACTATCAATATGCTGCGAAACATTTTGGAAGTCCTGATGGAGAGCACACCTCGTGAGATAGATGCTACTAAGCTTGAAAGAGGTTTGCTAGATATGGAAGATGTAGTGGCTGTTCATGAACTGCATATATGGGCCATTACTGTGGGAAAGGTTTTGCTTGCTTGTCATGTTAAAATCACACGTGAAGCAGATGCAGACGTGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTTTATAACATCAGCCATGTCACTATACAGATAGAGCGCTAG 699 0.4263 MALLLGHDHGHRHDGHGHSHGHDGHGHGHVFTVSSHHDSKHTKDDHHHTHDEDHPKDAHHHTDEDHHAHKEVTEPLLGESKDGTKKKQWNVNIRGAYLHVLGDSIQSIGVMIGGAAIWYNPRWQIVDLVCTLIFSVIVLGTTINMLRNILEVLMESTPREIDATKLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKITREADADVVLDKVIDYIKRVYNISHVTIQIER 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1354 232 MobiDBLite consensus disorder prediction 1 84 - -
Aed4g1354 232 SUPERFAMILY Cation efflux protein transmembrane domain-like 86 155 IPR027469 -
Aed4g1354 232 Gene3D Cation efflux protein transmembrane domain 45 153 IPR027469 -
Aed4g1354 232 TIGRFAM CDF: cation diffusion facilitator family transporter 43 232 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Aed4g1354 232 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 160 231 IPR036837 -
Aed4g1354 232 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 232 - -
Aed4g1354 232 PANTHER METAL TOLERANCE PROTEIN A1 1 232 - -
Aed4g1354 232 Pfam Cation efflux family 82 154 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1354 Aed-Chr4 16997390 16998088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1354 66 232 Inorganic Solute Cotransporters AT2G46800 79.412 2.55e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1354 K14689 - gmx:100790458 362.073