Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1350 ATGTTGATACTAGTGCTTGGACTAGCTTCAGCTACTTTGCTACTGATTCTTGCAGTTTATGTGTGCTATTACAAGAGAAAGGTATCAAAGTATGAGAGTAGGGACATTGAGAGTTCAGAACACAAGGAGGAAGAGGAAGTGGAGTCTCAGAAGGAGGATTTGATGATCTTTCAAGGTGGTGAGGACCTTACAATATGTGACATTTTGGATGCTCCTGGTGAAGTGATTGGAAAATCCAACTATGGAACACTGTACAAGGCTTTGTTGCAGAGGAGCAACAAGGTGAGGTTGCTAAGGTTTCTGAGGCCAGTTTGCACTGCAAGGGGTGAGGAATTGGATGAGATGATTCTGTTTCTTGGAAGGATAAGGCATCCTAACTTGGTTCCTCTTCTGGGGTTTTACTCTGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCCTTCTATAGGCATGGGAGTCTCACTCAATTCATAAGAGAAGGAAATGGAGAGTGTTACAAATGGTCCAACATATGTAGAATATCAATTGGTATAGCCAAAGGACTAGAGCATCTTCACACATCACATGAGAAGCCTATCATCCATGGAAACCTCAAGTCCAAAAACATCCTTTTGGACCGCTCTTACCAACCTTACATTGCAGATTCCGGCCTACATCTTCTGCTGAACCCTACAGCTGGACAGGAAATGCTCGAAAGTTCAGCGGCTCAGGGTTACAAGGCACCTGAGCTCATCAAAATGAAGGATGCTAGGGAGGAGAGTGATGTATATAGCCTTGGTGTGATCCTGCTGGAGTTGCTTTCTGGAAAGGAACCTATCAACGAGCATCCAACACCTGATGAGGATTTCTATTTGCCAAATTTCATGAGAAATGCGGTCCTTGGCCACAGAATAGCAGATTTATACCATCCTGCCATTCTTCTCAGAAACAGCAGAGATAATAACAACATTCCACCAGTCACAGAAGAATGCATTCTCAAAGTTTTTCAACTTGCTATGGCTTGCTGCTCCCCTTCTTCGTCAGTTAGACCTAACATAAAGCAAGTCCTCAAGAAACTTGGAGAAATTATTATTGGCCACTTTGGCAGCAGTGATACTGCACACTTTAAGATTCTTCAAAGTTTTGATGGGAAATTACAAAGATTGATTCGTTTACTGTCAAGACTCAAGAATGTGCTTCTGTCCCAAGAATTTGTAGCTAATATAATTGAACCTACAAAAGTGCAAAGGAATCTGAATAATTATGTAGGCCAGGAAGTGGGATCATTTGGTGGCAGGTTTTCAAAATCTCACCTACAAGAAGTTACATTGTTTGTTATGCTGGTAGGAGGGTGTGGTGGTTGGAAGTTAGGTGAGGGAGGGTGTGCTAATTCATTGCTGATACATCACTATCTAACTTCACAGGCTGTTGAAGCTCTTTCAATAATTCTATAA 1431 0.4228 MLILVLGLASATLLLILAVYVCYYKRKVSKYESRDIESSEHKEEEEVESQKEDLMIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTARGEELDEMILFLGRIRHPNLVPLLGFYSGPRGEKLLVHPFYRHGSLTQFIREGNGECYKWSNICRISIGIAKGLEHLHTSHEKPIIHGNLKSKNILLDRSYQPYIADSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDAREESDVYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRIADLYHPAILLRNSRDNNNIPPVTEECILKVFQLAMACCSPSSSVRPNIKQVLKKLGEIIIGHFGSSDTAHFKILQSFDGKLQRLIRLLSRLKNVLLSQEFVANIIEPTKVQRNLNNYVGQEVGSFGGRFSKSHLQEVTLFVMLVGGCGGWKLGEGGCANSLLIHHYLTSQAVEALSIIL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1350 476 Gene3D Phosphorylase Kinase; domain 1 33 147 - -
Aed4g1350 476 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 355 - -
Aed4g1350 476 ProSiteProfiles Protein kinase domain profile. 70 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1350 476 Pfam Protein tyrosine and serine/threonine kinase 74 352 IPR001245 GO:0004672|GO:0006468
Aed4g1350 476 Gene3D Transferase(Phosphotransferase) domain 1 149 363 - -
Aed4g1350 476 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 4 355 - -
Aed4g1350 476 SUPERFAMILY Protein kinase-like (PK-like) 73 352 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1350 Aed-Chr4 16885306 16891499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1350 35 355 Carbohydrate Esterase AT5G61570 60.245 6.81e-133 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed4g1350 PK_Tyr_Ser-Thr 7.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1350 - - gmx:100788898 617.846