Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1346 ATGAATGAGTTCGAGCTGGTTATGAAAGGAACTGAAGACCTTATTTGTGATGGTGATTTAATCCCCTTGAACTTGGGATTATATGAGAAACATAATAATGGTAGAGAAGTTGGGTTGATGGATTACCAAGTCGAAATGGAAGAGGGAGAAAGTTCTAGAGATTTGGGAATAGATGGCAATTCAATTGATGTGTCTTCTGCTGATGCTTTAATTTTACAACAGATGGAAGTAGATGAGAAGCCTGAAAATCCTTCTAAGATTGAGAATCAAGAAAAGGAAAAAGGCTATGACTCTAATTCCTCTATGGTAAATGCAGTTCAAGATGCCAATAGTAGTGGACAAGTGGAGCCTAGAACTAATGGCAAGAAAGGGATTGCATGCGGACTTGACGTAGCAATTTCTCAAGAAATCATTGAATGTCAGAAGGAAGATAAAACAAAGTTGGATAGTGCTAGTAAAAAGAGTAACCGTGGTGGGAACAAAGGAAAAAAGGAGAAAGTAGATAGAAAGAAGAGAGCGGAAAAGAACAAAAAACTTGGTAAACCAATAGCTGTCTCACATTGTCGCCATTATCACATGGGAAGGTGCCATGAGGGTGACAAGTGTCAGTTTTCACATGATGTGGTGCCTCATACAAAATCCAAGCCATGTACTCACTTTGCTCGTCACTCTTGCATGAAAGGGGATGATTGCCCTTTTGATCGCCAACTCTCAAAATATCCTTGTATCAATTTTGTGTCCAAAGGCTCTTGTTATAGAGGTGATGCTTGCTTGTACCAACCAAAGAAGACATCCCTACACCTTCAAATATGTGCAGACCAGAGTTGTCTCCACTTCTGCTCGGAAATGCAAATTCCAGCACACCACTTAACTACAACCATGGCTCTAGCTCTGTCCAGAAAAAACCGCTTTACTAATTTTGCGGGAATTCATTCAGGCATCAATGTTGAACATAAGGTGACAAACACTGTACAGAAACAGCCTACACCCCCTAAAGGAATTAGTTTCATCAATCTTGCAAAACCCAGCCCAAGTTCGCTGAATCAAGGCACAGTAACAACCAAGGAAAGTCCTGTACAAATTGGGACCTGTGAAGATCAAAGTGCATTTCATAAAACTCAAAACAAAGTGGAGATTCCTAAGAAATTGCCAGCTGTGACACCTAAGGGAATTAACTTTCTTTCTTTTGGCCAAGGCTCTGTCAGCAGTTTTAAAAATGCAATTCATTCCAATGTGAGTAGGGAAAATGGTATCAAGATACCTCAGTTATTCAATTTTGGTTTGCCTGAGCAGGCAAATTCCTCCCTAAATAAAGATAGTTACAACAAAGCTAGTGACATAAGAAAACAAAATGTACCACAGACTGATCTATTCTTAAATGAGATTTTAGGAAAAAATCAATCTGTGGCAGAAAGAATGACATCAAAGCCTCCAGAGAAAACCTCAGTAGATGTTTTTATGAGGAATCATAGCCATAGTAGAGATCAGTTCAAGAGGGAAAAACATCATCTGATATTTCTCAAAAACATGATTGAATGCATTACAGTCCATGGAGTATCAATGGCAAATGTATATAATAGCACTCTTCCAAATTTCATTATATCTTCTCCCACGGAACTTGCCTCCCATAGGATGGTTAAATGTGACTCAGATGGTTCGGTGTACAGGGTCGAATGCTCTTCAGCCTGTGCAGGCACATTCAGTGGTCTCATAGTGAAAATTGGTTGTGACTATAGATGA 1740 0.3937 MNEFELVMKGTEDLICDGDLIPLNLGLYEKHNNGREVGLMDYQVEMEEGESSRDLGIDGNSIDVSSADALILQQMEVDEKPENPSKIENQEKEKGYDSNSSMVNAVQDANSSGQVEPRTNGKKGIACGLDVAISQEIIECQKEDKTKLDSASKKSNRGGNKGKKEKVDRKKRAEKNKKLGKPIAVSHCRHYHMGRCHEGDKCQFSHDVVPHTKSKPCTHFARHSCMKGDDCPFDRQLSKYPCINFVSKGSCYRGDACLYQPKKTSLHLQICADQSCLHFCSEMQIPAHHLTTTMALALSRKNRFTNFAGIHSGINVEHKVTNTVQKQPTPPKGISFINLAKPSPSSLNQGTVTTKESPVQIGTCEDQSAFHKTQNKVEIPKKLPAVTPKGINFLSFGQGSVSSFKNAIHSNVSRENGIKIPQLFNFGLPEQANSSLNKDSYNKASDIRKQNVPQTDLFLNEILGKNQSVAERMTSKPPEKTSVDVFMRNHSHSRDQFKREKHHLIFLKNMIECITVHGVSMANVYNSTLPNFIISSPTELASHRMVKCDSDGSVYRVECSSACAGTFSGLIVKIGCDYR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1346 579 ProSiteProfiles Zinc finger C3H1-type profile. 182 209 IPR000571 GO:0046872
Aed4g1346 579 PANTHER PROTEIN SUPPRESSOR OF SABLE 41 476 - -
Aed4g1346 579 ProSiteProfiles Zinc finger C3H1-type profile. 212 233 IPR000571 GO:0046872
Aed4g1346 579 MobiDBLite consensus disorder prediction 144 169 - -
Aed4g1346 579 MobiDBLite consensus disorder prediction 79 95 - -
Aed4g1346 579 SUPERFAMILY CCCH zinc finger 186 207 IPR036855 GO:0046872
Aed4g1346 579 Gene3D - 169 237 - -
Aed4g1346 579 MobiDBLite consensus disorder prediction 77 99 - -
Aed4g1346 579 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 41 476 IPR045124 GO:0003723|GO:0045892
Aed4g1346 579 MobiDBLite consensus disorder prediction 144 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1346 Aed-Chr4 16805300 16810853 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aed4g1346 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1346 - - gmx:100816509 681.019