Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1344 ATGGTTTCCTTTAAAAATTACCTGCTTTATAAAAGAACAGAGAACCCATTGCATATCCTCAAACCTCGCACCATCTTCTTTTTCTCACAGGAACCAAATGGTACCTTGAGACATTGCCATTCCCGGAAGCCAAGCAGGGTGGGGCTTTTTTGGGACTTGGACAAAAAGCCACCCAATTCAATCCCACCTTATGAAGTTTCAAATAAGCTAAGAATAGCTGCATCTTCATTTGGGGTTGTTCGTTATATGGTGGCTTATGCAAATAGCCACACTTTTAGCCATGTCCCTCACTCTATGAGGGAAAGTAGGAAAGAGAAGGAACTATTATCGTTTAGAGAACAAAGGTGTCATCAAGCCAAATCAACCTCATCATTGGGGAGCAGGAGGGTGAAGCTGGTGGCCAAGTATTCTATGAAAATGAACAAGTATAAGAAGGCTGCAAGTAATGTTCTCACTCCCGAAGTGGGGTATGGTTTGGCAGATGAGCTCTAA 492 0.4268 MVSFKNYLLYKRTENPLHILKPRTIFFFSQEPNGTLRHCHSRKPSRVGLFWDLDKKPPNSIPPYEVSNKLRIAASSFGVVRYMVAYANSHTFSHVPHSMRESRKEKELLSFREQRCHQAKSTSSLGSRRVKLVAKYSMKMNKYKKAASNVLTPEVGYGLADEL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1344 163 PANTHER - 112 163 - -
Aed4g1344 163 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 36 118 - -
Aed4g1344 163 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 112 163 - -
Aed4g1344 163 PANTHER - 36 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1344 Aed-Chr4 16799605 16800235 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1344 46 163 C2H2 Transcription Factor Family AT4G12240 47.742 1.61e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1344 - - gmx:100785257 221.861