Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1341 ATGTTCTTTTTCTCACCAGAACCAAATGGTACCTTGAGACATTGCCATTCCCGGGTTAAAAATTTGAAATTTAAACCAAATGAGAAGCCAAGTAGAGTGGGACTTTTTTGGGACTTGGACAATAAGCCACCCAATTCAATCCCACCTTATCAAGTTGCAAATAAGCTAAGACTAGTTGCATCTTCATTTGGGGTTGTTCGTTGTATGGTGGCTTATGCAAATAGCCACACTTTCAGCCATATCCCTCACTCTGTGAGGGAGAGTAGGAAAGAGAAGGAACTATTGCATTGTTTAGAGAACAAGGGTGTCATTAAGGCAAATCAACATCATTGTTGTAAGGTTTGTTGGAGAAAGTTTCATACTAATGACAAGCTTGTTAACCATTTCAAGCAATTGCACAAGCGTGAGCATGCCAAGAGGATGAACCAAATAGAGTCTACTAGGGGGAGTAGGAGGGTGAAGCTGGTGGCCAAGTATTTTATGAAAATGTACAAGTATAAGAAGGCTGCAAGTGATGTTCTCACTCTCAAAGTGGGGTATGGTTTGGAAGATGAGCTCCAAAGGGCTAGCTTTTGGGTTCGAACTGTGTTGGACAAGCCACAAGCTGCAGACCAAGCATTGCAAAGCCACATTATGGATATCATGGATCATAGGCGGGTTGAGTGTGTGGTCCTTGTGTCTGATGATTATGACTTTGTTGATGAAGCCAAGATGCGGTGTTTGAAGATAGTTGTCATTGGGGATATTGATGATGGCTTCTTGACTGTTGATATTGCATTTTCTTGGGAGGAGATTTTGATGGGGAAAGCTAAAAAGACCAATTCATTTGATGAGGTGTTTGATATACTAGAATTGATTCAACTGGAATGTGGATTGGATCAAAGCTTCGTGTTTCCTTCTGTTGATATGAATTATGATTCACTTAATTCAAATCTGCTTCAGTTTTAA 948 0.404 MFFFSPEPNGTLRHCHSRVKNLKFKPNEKPSRVGLFWDLDNKPPNSIPPYQVANKLRLVASSFGVVRCMVAYANSHTFSHIPHSVRESRKEKELLHCLENKGVIKANQHHCCKVCWRKFHTNDKLVNHFKQLHKREHAKRMNQIESTRGSRRVKLVAKYFMKMYKYKKAASDVLTLKVGYGLEDELQRASFWVRTVLDKPQAADQALQSHIMDIMDHRRVECVVLVSDDYDFVDEAKMRCLKIVVIGDIDDGFLTVDIAFSWEEILMGKAKKTNSFDEVFDILELIQLECGLDQSFVFPSVDMNYDSLNSNLLQF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1341 315 ProSitePatterns Zinc finger C2H2 type domain signature. 111 133 IPR013087 -
Aed4g1341 315 PANTHER - 22 273 - -
Aed4g1341 315 CDD PIN_LabA-like 121 248 - -
Aed4g1341 315 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 138 IPR013087 -
Aed4g1341 315 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 22 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1341 Aed-Chr4 16788845 16790189 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1341 27 272 C2H2 Transcription Factor Family AT4G12240 61.111 1.85e-108 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1341 - - gmx:100789840 433.721