Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1340 ATGCAAGCCGAATTGCACCACATGAATGCTGAGAATCAACGGTTGAAAGAGTTAGGTGATCAGATGAACAATAAGTACAATGCTCTACACAAACAACATAGGAAACTAAAAGAGAAACAACATAAGAATGAGATTAACAAAGCCATAGAGGAGAAGCCTGAGAAAGATTATAGTCCAATTAGTCCAAGGCCATTTTTGGATTTTGGAGTCGCTATAAAACAAGAGAGTTCGCATCAGTATACAAAGGAAAAACTGGGAGAAAGCAAGACTCAAAATATTTGTAGTACTAGCAGAGACCAACAATATGAGAGTAATACTCCAGGTGAAAATGCTAATAATATTACTGGTTGGCTCTCAAACGAAGTCACAAGAAGATTGAGTTCTTTCAGGGATGTTGATCAAGCGTCAGAAACCATGTCAATGATCAAGAAAGCTCGTGTATCAGTTCGAGCACGATCAGAGTCTTCCATGGTACAAAGGAGTGCGGAGGATGAAAGTGTATTGATCACAACATATGAAGGGAAACACAATCATGTACTCCCTCCAACTGCAAAGGCAATGGCATCCACCACATCATCAGCTGCAACAATGCTTCTTTCAGGATCAATGCCAAGTTCAGATGGCCTTATACACCCAAACATGTTGGAATGCTCACACAACATAGCAACCCTCTCAGCTTCAGCTCCATTTCCAACTATCACTTTGGATCTCACTAATAATAATTCCTTACAAGGGCCACCACAGCATAACCAACATGGCCTCCTTTCCCAACTTTTGGCTCAGATGTTTATGTCATCAGCTCCAAATATTTTTGATAATGTGTCTCAGGGAACTGCAGAAACTGCTTCATTTGTAAATGCAGCAACAGCTGCTATCACTGCAGACCCCAAATTCAGTGCAGCTCTTATGGCTGCTGTAACATCTATTATTGGAAGTTCTTCACATCCAAACATTAATGTTACAAGTAGTGGAGATCCAGGATTGCGATAA 990 0.4051 MQAELHHMNAENQRLKELGDQMNNKYNALHKQHRKLKEKQHKNEINKAIEEKPEKDYSPISPRPFLDFGVAIKQESSHQYTKEKLGESKTQNICSTSRDQQYESNTPGENANNITGWLSNEVTRRLSSFRDVDQASETMSMIKKARVSVRARSESSMVQRSAEDESVLITTYEGKHNHVLPPTAKAMASTTSSAATMLLSGSMPSSDGLIHPNMLECSHNIATLSASAPFPTITLDLTNNNSLQGPPQHNQHGLLSQLLAQMFMSSAPNIFDNVSQGTAETASFVNAATAAITADPKFSAALMAAVTSIIGSSSHPNINVTSSGDPGLR 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1340 329 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 158 317 IPR044810 GO:0003700
Aed4g1340 329 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 158 IPR044810 GO:0003700
Aed4g1340 329 Coils Coil 5 39 - -
Aed4g1340 329 Gene3D WRKY domain 121 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g1340 329 ProSiteProfiles WRKY domain profile. 158 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g1340 329 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 158 317 - -
Aed4g1340 329 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1340 Aed-Chr4 16777982 16779828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1340 1 315 WRKY Transcription Factor Family AT1G62300 35.840 1.61e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1340 - - gmx:100804246 323.168