Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1334 ATGTCAAATTGTGGTGGCCAAAAGTTTTTCAAGAGGTTCTGTGTGGATGAATTCCAAATGGGAAATCTCCCATATAGCAGCTTTTTGTCCAATGATCTCTTGCCATCCCTTGGAGCCAGAATCAACCAAGAAACAAGGCTTAGAAGATGCATAATTTCCCCTTTCAATCCACGTTATAGGGCATGGGAGATGCTACTAATTGTCCTAGTTGTTTACTCTGCATGGATTTGCCCCTTTGAGTTTGCCTTTCTTACTTACAAGCAAGACACACTATTCATCATAGACAACATTGTCAATGCCTTCTTTGCCATTGACATCATGCTCACATTCTTTGTTGCTTATCTTGATCACCATTCCTACCTTCTTGTTGATCGTACATATCTACCTGGTTCATCTTTGATGTCTGCTCAACTGCACCATTTCAATCCATCAGCCTCCTATTCACTGATCACAGCAGTGAGATTGGCTTCAAAGTTCTCAACATGCTTCGGTTGTGGCGTCTCAGACGTGTCAGTTCTCTGTTTGCAAGGTCCAACATTATATGCTATATGA 552 0.4149 MSNCGGQKFFKRFCVDEFQMGNLPYSSFLSNDLLPSLGARINQETRLRRCIISPFNPRYRAWEMLLIVLVVYSAWICPFEFAFLTYKQDTLFIIDNIVNAFFAIDIMLTFFVAYLDHHSYLLVDRTYLPGSSLMSAQLHHFNPSASYSLITAVRLASKFSTCFGCGVSDVSVLCLQGPTLYAI 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1334 183 PANTHER POTASSIUM CHANNEL AKT1 1 126 IPR045319 GO:0005249|GO:0006813
Aed4g1334 183 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 126 - -
Aed4g1334 183 Pfam Ion transport protein 60 122 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed4g1334 183 SUPERFAMILY Voltage-gated potassium channels 54 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1334 Aed-Chr4 16469342 16480508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1334 1 125 Ion Channels AT4G18290 73.600 2.52e-61 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1334 K21867 - gmx:100800340 232.646