Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1332 ATGGCTTCGGAGAAGAAGCTTTCGAACCCCATGCGGGAAATCAAGGTCCAGAAGCTCGTCCTCAACATCTCCGTTGGCGAGAGTGGCGATCGTCTCACCAGAGCCGCAAAGCAGGGGTCCATTCATTGGCCACCTGACTGCCGCTTAGAGCCAAAAGGAAAATACCAGAAGAAGATCCTTGAAACCCTTGGGTTGTACACTGTCCGTTCTTTTGGTATCAGAAGAAATGAAAAGATTGCATGCTATGTCACTGTTAGAGGTGACAAGGCAATGCAGCTTTTGGAGAGTGGATTGAAGGTGAAAGAATATGAACTCCTGCGAAGAAACTTTAGCGACACCGGGTGTTTTGGCTTTGGTATTCAGGAGCACATTGATTTGGGAATCAAGTATGATCCTTCAACTGGTATTTATGGAATGGACTTCTTTGTTGTTTTGGAGCGTCCTGGTTATCGTGTTGGACGTCGCCGCCGTTGCAAGTCCCGTGTAGGAATCCAGCATCGGGTTACCAAGGAGGATTCGATGAAGTGGTTCCAGGTGAAATATGAAGGTGTGATCCTCAACAAGTCACAGGCCATTGTTTAA 582 0.4742 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKQGSIHWPPDCRLEPKGKYQKKILETLGLYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDSMKWFQVKYEGVILNKSQAIV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1332 193 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 192 IPR002132 GO:0003735|GO:0005840|GO:0006412
Aed4g1332 193 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 192 - -
Aed4g1332 193 Pfam ribosomal L5P family C-terminus 78 176 IPR031309 -
Aed4g1332 193 Gene3D - 3 188 IPR022803 -
Aed4g1332 193 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 38 IPR002132 GO:0003735|GO:0005840|GO:0006412
Aed4g1332 193 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 57 184 IPR002132 GO:0003735|GO:0005840|GO:0006412
Aed4g1332 193 SUPERFAMILY RL5-like 8 185 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1332 Aed-Chr4 16353063 16355756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1332 1 193 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 80.612 7.67e-110 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1332 K02868 - gmx:100305912 296.975