Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1313 ATGGCACAAGAAGAGGTGGTTTTGTTGGATTTTCGTCCCAGTATGTTTGGTATGAGAGTTAGGATTGCATTGGCAGAAAAAGGGATTAAGTACTTGTACAAGGAAGAAAACTTGAGGAACAAAAGTCCTTTGCTTTTGCAGAACAACCCCATTCACAAGAAAATCCCAGTTCTAATCCACAATGGAAAACCCATTTGTGAGTCTCTCAATATTGTTCAGTATATTGATGAGTTTTGGAAGGATAAAGCTTCATTGTTGCCCTCTGATCCATACCAAAGAGCTGAAGCTAGGTTCTGGGCTGATTTTATTAATACAAAGGTAGATCAACATGAGAAGGCAAAGAAAGAATTGAAAGAAAGCTTGAGGCAGTTGGAGGAGGTTCTTGGGGACAACCCATATTTTGGAGGTGACACATTTGGGTTTCTTGATGTTGCTTTAATCCCTTTTCATCAATGGTTTTATGCTTATGAGACCGTGGGTAGCTTCAAATTGGACTGTCCCAAACTCATAGAATGGGCCAAGAGATGTTTGCAAAGAGAAAGCGTCTCCAAATCCGTTGCTAGTGAAAAAGAGATCTATGAGTTTGTTATGCGCTTTAGAAAAGGGTATGAGTTGGATTAA 621 0.3961 MAQEEVVLLDFRPSMFGMRVRIALAEKGIKYLYKEENLRNKSPLLLQNNPIHKKIPVLIHNGKPICESLNIVQYIDEFWKDKASLLPSDPYQRAEARFWADFINTKVDQHEKAKKELKESLRQLEEVLGDNPYFGGDTFGFLDVALIPFHQWFYAYETVGSFKLDCPKLIEWAKRCLQRESVSKSVASEKEIYEFVMRFRKGYELD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1313 206 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Aed4g1313 206 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 199 IPR045073 -
Aed4g1313 206 SUPERFAMILY GST C-terminal domain-like 77 201 IPR036282 -
Aed4g1313 206 Pfam Glutathione S-transferase, C-terminal domain 108 180 IPR004046 -
Aed4g1313 206 SFLD Glutathione Transferase (cytosolic) 2 203 IPR040079 -
Aed4g1313 206 SFLD Main.3: Omega- and Tau-like 2 203 IPR045073 -
Aed4g1313 206 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 5 199 - -
Aed4g1313 206 CDD GST_N_Tau 6 79 - -
Aed4g1313 206 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 69 199 IPR010987 -
Aed4g1313 206 Coils Coil 100 130 - -
Aed4g1313 206 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Aed4g1313 206 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Aed4g1313 206 Gene3D - 89 206 - -
Aed4g1313 206 CDD GST_C_Tau 90 199 IPR045074 GO:0004364|GO:0006749
Aed4g1313 206 Gene3D Glutaredoxin 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1313 Aed-Chr4 15601008 15602673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1313 4 203 Glutathione S-transferase Gene Family AT1G78340 57.944 2.57e-89 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1313 K00799 - mnt:21386514 287.345