Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1292 ATGATTTTGGCACTGAAAATAGGGAGAAAATTCAAGAAAACTGAGTCATCATCACTAAAGATACCACCAGGACCATGGAAGCTACCAATCATAGGAAACATACACAATCTTGTTACGTCCACACCACCACACAGAAAATTAAGAGACTTGGCAAAAATACATGGACCCTTGATGCATCTTCAACTTGGGGAGCTCTTCACTATTATTGTTTCCTCAGCAGAATATGCCAAGGAGATAATGAAAACCCATGATCTCATCTTTGCATCAAGGCCTCGAATTCTAGCTTCAGATATATTGTCCTATGAATCCACCAATATTGTTTTTTCGCCTTATGGAAACTATTGGAGACAGCTGCGGAAAATATGCACAATGGAGCTTTTCACCCAAAAACGTGTCAACTCATTCAGTCCAATAAGAGAAAAAGAGCTCGCAAATCTCGTCAGAATGATTGATTCATATAAAGGGTCTCCCATGAACCTCACTGAAGCAGTGGTTTTATCGATATATAACATCATTTCAAGAGCTGCGTTCGGCATGAAATGCAAAGATCAAGAAGAATTCATATCAGTGGACATTTTTTCTGCAGGAGGTGATACAGCTGCTTCTACCATAAATTGGGCAATGTCAGAGATGATAAGGGATCCAAGAGTAATGAAGAAAGCACAAGTTGAGGTAAGAGAGGCATTCGATATGAAAGGAAGGGTTGACGAAATTTGCATCAATGAACTCAAATATTTGAAATCAGTTGTCAAAGAGACACTAAGGTTACACCCTCCAGCTCCTCTTTTACTTCCAAGAGAATGTGGACAGGAATGTGAGATTGATGGGTATCAAATACCAGTTAAGAGTAAGATAATTGTGAATGCTTGGGCAATAGGAAGAGATCCAAAGTATTGGAGTGAAGCAGAGAGGTTTAATCCAGAGAGATTCATTGATAGCTCTATTGACTACAAAGGGACCAATTTTGAGTACATTCCATTTGGTTCTGGAAGAAGAATATGCCCTGGCATTACATTTGGTTTGATAAATATTGAGTTGACCCTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCAAATGGAATGAAAAATGAGGACTTAGACATGACAGAGGAATTTGGAGTGACAGTTAGAAGAAAAAATGACCTATACTTGATACCGGTCCCTTCTAATCCTTTCTACGGAAGATAA 1194 0.3869 MILALKIGRKFKKTESSSLKIPPGPWKLPIIGNIHNLVTSTPPHRKLRDLAKIHGPLMHLQLGELFTIIVSSAEYAKEIMKTHDLIFASRPRILASDILSYESTNIVFSPYGNYWRQLRKICTMELFTQKRVNSFSPIREKELANLVRMIDSYKGSPMNLTEAVVLSIYNIISRAAFGMKCKDQEEFISVDIFSAGGDTAASTINWAMSEMIRDPRVMKKAQVEVREAFDMKGRVDEICINELKYLKSVVKETLRLHPPAPLLLPRECGQECEIDGYQIPVKSKIIVNAWAIGRDPKYWSEAERFNPERFIDSSIDYKGTNFEYIPFGSGRRICPGITFGLINIELTLAFLLYHFDWKLPNGMKNEDLDMTEEFGVTVRRKNDLYLIPVPSNPFYGR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1292 397 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 327 336 IPR017972 GO:0005506|GO:0016705
Aed4g1292 397 PRINTS E-class P450 group IV signature 318 334 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1292 397 PRINTS E-class P450 group IV signature 293 311 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1292 397 PRINTS E-class P450 group IV signature 334 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1292 397 PRINTS E-class P450 group IV signature 243 259 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1292 397 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 191 391 - -
Aed4g1292 397 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 190 - -
Aed4g1292 397 Gene3D Cytochrome P450 14 186 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1292 397 PANTHER CYTOCHROME P450 71B11-RELATED 191 391 - -
Aed4g1292 397 PANTHER CYTOCHROME P450 71B11-RELATED 2 190 - -
Aed4g1292 397 Pfam Cytochrome P450 190 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1292 397 Pfam Cytochrome P450 22 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1292 397 Gene3D Cytochrome P450 187 384 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1292 397 SUPERFAMILY Cytochrome P450 22 390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1292 397 PRINTS P450 superfamily signature 325 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1292 397 PRINTS P450 superfamily signature 195 212 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g1292 397 PRINTS P450 superfamily signature 248 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1292 Aed-Chr4 14542704 14545250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1292 12 389 Cytochrome P450 AT3G26180 40.420 9.98e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1292 - - pvu:PHAVU_003G009400g 528.865