Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1291 ATGTTCATTGCTGGATTCTCATTCACTTGGTATTTTGAATTAAAAGCAGTTATTCATTTCGAAAGCTACTGCCGAGAGTTCACAAGTTTCTCAAGCTTGATGGGGACACAAAAATCTAATATGTTTGATGCACCTTACAAATATTTGATGCCTGAAGATGAGGAAATTCTCGACAGACCTTTGCCATCACATTGGACTCCTTCTATGCAGGCATATAACAATTCTGGGTCTGCTCCAACTTCCTTTTTAAATCAACAAGCAGCTGGTTCTTACATGCCTCTCTACCTGTGGCCAAATCAGGCAAACAGCACACTACTTCAATCTGATGCTTTGCATGATCCAAGGATGCTCTTCAGTAAACCTACAGTAGCTGGGGATGCTGTACTGGCTTTTTCAGAAATAGTACACAGGACTTTTGGCGAACAAAACACAAATTCAATAAAAAAAATTGAAGCATATGAAAACAAGGGATCACCAGATGAAGACCATGAGACTACTAATGATTTTCCTTCAACTAAGAAGCAGCACTATAATTTGCTTGAAAATGCAAGTTCAACGAAACTGAATCAGGATTTGGAGGCAGGCCTAGATGCATCTGGCACTAGTGACCAACTTGTAAATTTGGAAAAAGATGAAATAAGAAGAGAAAGAAAAAGACAGTCAAACAGGGAATCGGCAAGGAGATCAAGGATGCGGAAAGAGAAAGAATGTGAAGATCTACATAAAAAAATGGAAATTCTTAAGGATGAAAACTCCATGCTCACACAGAGGCTCAAGAGTCTCTCTGAAGAGTGTCTGGAGATCTGCAATGAAAACGATGCCATAGAGGTCCGTCATTTAAACTTCTAA 849 0.3922 MFIAGFSFTWYFELKAVIHFESYCREFTSFSSLMGTQKSNMFDAPYKYLMPEDEEILDRPLPSHWTPSMQAYNNSGSAPTSFLNQQAAGSYMPLYLWPNQANSTLLQSDALHDPRMLFSKPTVAGDAVLAFSEIVHRTFGEQNTNSIKKIEAYENKGSPDEDHETTNDFPSTKKQHYNLLENASSTKLNQDLEAGLDASGTSDQLVNLEKDEIRRERKRQSNRESARRSRMRKEKECEDLHKKMEILKDENSMLTQRLKSLSEECLEICNENDAIEVRHLNF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1291 282 Gene3D - 213 267 - -
Aed4g1291 282 CDD bZIP_plant_GBF1 215 265 IPR045314 GO:0003700|GO:0006355
Aed4g1291 282 SUPERFAMILY Leucine zipper domain 213 268 IPR046347 GO:0003700|GO:0006355
Aed4g1291 282 PANTHER BZIP TRANSCRIPTION FACTOR 34 143 - -
Aed4g1291 282 PANTHER BZIP TRANSCRIPTION FACTOR 150 276 - -
Aed4g1291 282 Coils Coil 223 264 - -
Aed4g1291 282 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 212 264 IPR004827 GO:0003700|GO:0006355
Aed4g1291 282 SMART brlzneu 210 274 IPR004827 GO:0003700|GO:0006355
Aed4g1291 282 MobiDBLite consensus disorder prediction 207 236 - -
Aed4g1291 282 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 217 232 IPR004827 GO:0003700|GO:0006355
Aed4g1291 282 PANTHER G-BOX-BINDING FACTOR 3-RELATED 34 143 IPR044827 GO:0003700|GO:0006355|GO:0043565
Aed4g1291 282 PANTHER G-BOX-BINDING FACTOR 3-RELATED 150 276 IPR044827 GO:0003700|GO:0006355|GO:0043565
Aed4g1291 282 Pfam bZIP transcription factor 211 267 IPR004827 GO:0003700|GO:0006355
Aed4g1291 282 MobiDBLite consensus disorder prediction 195 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1291 Aed-Chr4 14492743 14499126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1291 34 276 bZIP Transcription Factor Family AT4G36730 28.720 2.00e-21 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed4g1291 bZIP_1 6.5e-15 CL0018