Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1288 ATGTTCGTTATGGAGCTCACACTGAGGTCTTGGGCTAATGCTGAAGAGGAAAAAAGGAGGACCTTGAAGAAGAGTAACATTACATCAACAATAATAAGGAATGATGTGTTTGGTTTTCTTGTTGGTGTCATAGGGGATAAAACTATGAACCATCAAGTGTTTGAAGACATACCAAGAAATGACATAGATGAGAATGTTCCTAACTATTATATGTCACCTCATCAACAACGTGTTCTAGGCCCACCATATGGTGTTCCGATAATGGATATTGGAAGACCCATTCTCGATCAAAATCATCATGGGATGCAAACCCATCCTTCCCCAACTCAAATGTTCCCTGACCTTGGACAACAAAACAACCTTTCTCCCAAGTCAGATGATTGA 384 0.401 MFVMELTLRSWANAEEEKRRTLKKSNITSTIIRNDVFGFLVGVIGDKTMNHQVFEDIPRNDIDENVPNYYMSPHQQRVLGPPYGVPIMDIGRPILDQNHHGMQTHPSPTQMFPDLGQQNNLSPKSDD 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1288 127 MobiDBLite consensus disorder prediction 100 127 - -
Aed4g1288 127 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 121 - -
Aed4g1288 127 Gene3D Histone, subunit A 1 45 IPR009072 GO:0046982
Aed4g1288 127 SUPERFAMILY Histone-fold 1 46 IPR009072 GO:0046982
Aed4g1288 127 MobiDBLite consensus disorder prediction 96 127 - -
Aed4g1288 127 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 1 121 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1288 1 93 CCAAT-HAP5 Transcription Factor Family AT1G08970 40.426 9.64e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1288 K08066 - jre:109010478 102.064