Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1271 ATGTTTAGCTTTTCAGTAATTTCAATGGAGATGCAGTGGTCAATTGTAGATGGTGCTTGTATCATTGATTCCGTGGATTTGGGACCCAACAACTACATGGGGCACAATAGAACAGTATCAAGATCAATTCAAGAACTTGTTTATGTCTTTGATTCCATGGACGAGATTAATAGCAGAATTTTAGCATCATCTGAAGTTGGTGAGCACAGTAGAGCAGTATCAAGAACAAATGGAGAACTTGTTTTTATCTTTGATTCTACTAACTTGGGTCACGATCACAGCAATATGGAGAACAACGATGGAACTTTAAGAGTGATTCCTGTAAATCAAGAAGACTCCATTAAGAATCTTGAAAGGGTCACGATCGAAGAAAAACAGCAGTCTCCAAACTCGATGTGTTCCATATGTCTCGGGACACTCTCAGTTGGTTCAGAAGCAGTTCGTATACCCGATCCCTGTTCGCATGTCTTTCATCAACGTTGTATCACAAAATGGTTCAACATCAGTAACACATGTCCTTTGTGTCGCAGGACCATCTAG 540 0.4 MFSFSVISMEMQWSIVDGACIIDSVDLGPNNYMGHNRTVSRSIQELVYVFDSMDEINSRILASSEVGEHSRAVSRTNGELVFIFDSTNLGHDHSNMENNDGTLRVIPVNQEDSIKNLERVTIEEKQQSPNSMCSICLGTLSVGSEAVRIPDPCSHVFHQRCITKWFNISNTCPLCRRTI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1271 179 SMART ring_2 133 175 IPR001841 -
Aed4g1271 179 SUPERFAMILY RING/U-box 113 179 - -
Aed4g1271 179 ProSiteProfiles Zinc finger RING-type profile. 133 176 IPR001841 -
Aed4g1271 179 PANTHER SI:CH211-59O9.10 42 179 - -
Aed4g1271 179 SMART ringv_2 132 176 IPR011016 GO:0008270
Aed4g1271 179 Pfam Ring finger domain 132 176 IPR001841 -
Aed4g1271 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 179 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1271 Aed-Chr4 13641820 13642359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1271 114 176 C3H Transcription Factor Family AT1G14200 38.095 4.56e-12 59.7