Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1252 ATGGATTGTGCAGCAACAAGAAAGACACAAAAGGCTGACCGAGAAAAGTTAAGGAGGGATCGACTCAATGAACAGTTCGTAGATCTGGGTAACATTTTAGGTGATACAATTCAATTGCTGAAGGACCTTACTTCTCAAGTTAGTAAACTCAAAGAGGAATATACTATGCTAAATGAAGAATCTCGTGAGTTGACTCAGGAGAAAAATGATCTCAGGGAAGAGAAGGCTTCTCTTAAATCAGATATTGAGAATTTGAATAATCAGTATCAGCAGCAGCTCAGGACAATGTATCCATGGACTGCAATGGATCATTCAGTTATGATGGCTCCGCCGTCGTATCCATATCCAATGCCAATGGCAGTACCTCCTGGTCCAATTCCCATGCAGCCATTCCCCTTCTATGCTAATCAACATCCTGCAGTCATCTCCAACCCTTGTTCAACTTATGTTCCTTATTTACCCCCCAATACCATTGTCGAACAACAATCCACCCAATATGTTTCCCCTCCGCTTCATCCGGGTGGCGGCCGGTCCAATGTGTCAGGAAAACAAGAGTCCAAGAGTAAATCGTCCAGGGAGAGCAAGGCCGGAAAGAATGGGGACCCTAACGATGATTTATCATCGGGACAAAGAAAGTCCAGCAAAAAGTCGTCAAGGAGGGAAAGCAACTGCACAGAAGGGAGTTCATTAGGTAGGTCGTGTTCTTCGTCTCGTAGCGTTCAGGATAGCTCATCTAGCAGTGTAGTCGTGAGCAGAAAGGATAACAACGAATGA 774 0.4457 MDCAATRKTQKADREKLRRDRLNEQFVDLGNILGDTIQLLKDLTSQVSKLKEEYTMLNEESRELTQEKNDLREEKASLKSDIENLNNQYQQQLRTMYPWTAMDHSVMMAPPSYPYPMPMAVPPGPIPMQPFPFYANQHPAVISNPCSTYVPYLPPNTIVEQQSTQYVSPPLHPGGGRSNVSGKQESKSKSSRESKAGKNGDPNDDLSSGQRKSSKKSSRRESNCTEGSSLGRSCSSSRSVQDSSSSSVVVSRKDNNE 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1252 257 Coils Coil 33 95 - -
Aed4g1252 257 MobiDBLite consensus disorder prediction 166 257 - -
Aed4g1252 257 MobiDBLite consensus disorder prediction 208 222 - -
Aed4g1252 257 Coils Coil 5 25 - -
Aed4g1252 257 MobiDBLite consensus disorder prediction 186 200 - -
Aed4g1252 257 MobiDBLite consensus disorder prediction 223 257 - -
Aed4g1252 257 PANTHER TRANSCRIPTION FACTOR BHLH121 1 254 IPR044579 GO:0003700|GO:0055072
Aed4g1252 257 PANTHER TRANSCRIPTION FACTOR BHLH121 1 254 - -
Aed4g1252 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 68 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1252 Aed-Chr4 13108958 13114016 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1252 1 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 60.090 1.22e-71 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1252 - - gmx:100804250 329.717