Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1236 ATGGGTACTGATGCAGTAATAAGCGAAGGAGGATACTCTCTGCTGAAGGACTTAAGACTCGAAATTGAAGTAAAGGAGGGAACTTTCTCCCTCTGCTTTTGGCTTTATTTGACGAGTTCCACTACCTTCCCTGTTACCATCATTCAACAGGTTTTCTCTGATATCTCCGAAAGTGCTCCTTTTCTTGTTATTGATGATAATAAGAGAATCCATATGTTACCAGTTCTTCTCTTACATGAAGAAGCTCCTGATACCGGCAATATAAATTCCTTGGCAGAAGTTCCACATGCAACCATTGATTTTGAGTTTCTTTTGGAAAAATGGGTTCATGTTGGATGTGAGGTCTGTCCAGATCATATCCAGCTTCAGATTAATGGAGAGATTGTAGTAGAGAAGTCTTTGTGTCCCTTATTAAATAAGGAATCCAGTTCAAGTGATATGAAGAAATTAACTTTGGCAAATGTTGGTGGAGATGGAAATAGTGTGCAGGGTTATGTGCACAATTTTGAAATATTTCCTATTATTACTTCTATTAAAGATTGCCATTTAAAGGACCCTCCTTTGAAGTTATCAATTGATGAATCGTCTGCCTCTGAGATTGAAGAAGAAAGTGATGGTTTTTGGGGCATTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGATGTTGTTCTATCAGATGCTTTTGGACAGGCTGTAGATAGGGAGAATGAGGTTTTTGCTTCCCTTGTGTATGCCGACACGGGTGCACCAGTGGAGAATACAACCGATGATGAAGCACCCCTTTTAGCTAGTTATGATGGAATAGAATTTTCCTCTTGCGAAAGACCAAGCAAGCTTTTGCTGGGACGTGCTTCATTTAAGCTCAAAATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAGATTTTGTGTTCCAAAACTAGGAAATTATCCTTTTCTTGAGGCATATTCTCGTCCAATTCGATGCATCTCCCGAAGCCGTAACACAAGATTGTCCACTCTGGTTTGGAAAAGGTCAACTGCTCTTAGTTTCCTTAGTTTATCTCAATCTGCAGCTATGGATGATGGGTCCTTGGAACTTCAGCATTCCAGTCATGAAGCACAAGCCAATCCAGTGATGAAGCGGTTTAGACTTGGTCAAGACAAGATATCTGTATCAGTGAAGGCTGACCCCACCTTAGAGTTAGAGCAACCTGATGAAGAATGTAATTCTCATGCCTGGACTGCTAACCAGGTTGAGAGTGGGTTTCCAACAAGCATGGATGGAAGGTCAACAAACTTCAATGAAGCAGATGATTCTCCATCTGATTCAGAGAGTACAGGGGAGGAGAATTCACCTCTAAATAGTATGGCAAGTAGAAGATATCCAATATCTGATATGACCATTTTCAAATACTGCCTTGCAAGCTTGGCTGAGAGATCTCTCATGCTTAAGGAAATTTCTACCTCTTCTTCTGAAAAAGAAATTTCAGAATTGGCTCATCACGTGTCACTCTATTCAGGATGTTCACACCATGGAAACCAAATATTATTGGCCAAGAGATTGATAAAAGATGGAACTAATCTTTGGAAGGGGATGTCTCCAAACAATCACCACATTCCTTGGGAGAGTGCAGTGTATGAGATTGAAGAGCAATTCATGAAGATTTCTTCTTGTTGTTCAAGATCTCTCTCACCTCAGGACCTGAATCTCCTGAGAAGGATTGCTGGATGTCAAGAGTACCTAACACAAGAGAATTTTGAGAAGTTGTGGTGTTGGTTGTATCCTGTTGCATTTATAATATCAAGGGACTGGATAAATCCTATCTGGAATTCCACATCACCTAAGTGGATAGAAGGATTCATAACTAAGGAGGAAGCAGAAGCTTCACTTCAAGGTCCCACAGGATTTCAAGAACCTGGTACCTTTATACTCCGATTTCCTACCTCAAGAAGCTGGCCACACCCAGATGCTGGTAGCCTAGTTGTAACCTATGTGGGCAATGACTACAAACTTCACCACAGGTTACTTTCTATGCATCATGTTTATGGGTCTTATAGCTCTGGTGATAAAAGAGTTGACGTGAAACCGCTGCAAGATATGCTATTGGCAGAACCTGAGCTGTCTCAATTGGGAAGGTGA 2142 0.4108 MGTDAVISEGGYSLLKDLRLEIEVKEGTFSLCFWLYLTSSTTFPVTIIQQVFSDISESAPFLVIDDNKRIHMLPVLLLHEEAPDTGNINSLAEVPHATIDFEFLLEKWVHVGCEVCPDHIQLQINGEIVVEKSLCPLLNKESSSSDMKKLTLANVGGDGNSVQGYVHNFEIFPIITSIKDCHLKDPPLKLSIDESSASEIEEESDGFWGIVGGKASCRRNFSLDVVLSDAFGQAVDRENEVFASLVYADTGAPVENTTDDEAPLLASYDGIEFSSCERPSKLLLGRASFKLKISQLSSKCDNRLFLIRFCVPKLGNYPFLEAYSRPIRCISRSRNTRLSTLVWKRSTALSFLSLSQSAAMDDGSLELQHSSHEAQANPVMKRFRLGQDKISVSVKADPTLELEQPDEECNSHAWTANQVESGFPTSMDGRSTNFNEADDSPSDSESTGEENSPLNSMASRRYPISDMTIFKYCLASLAERSLMLKEISTSSSEKEISELAHHVSLYSGCSHHGNQILLAKRLIKDGTNLWKGMSPNNHHIPWESAVYEIEEQFMKISSCCSRSLSPQDLNLLRRIAGCQEYLTQENFEKLWCWLYPVAFIISRDWINPIWNSTSPKWIEGFITKEEAEASLQGPTGFQEPGTFILRFPTSRSWPHPDAGSLVVTYVGNDYKLHHRLLSMHHVYGSYSSGDKRVDVKPLQDMLLAEPELSQLGR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1236 713 ProSiteProfiles Src homology 2 (SH2) domain profile. 617 702 IPR000980 -
Aed4g1236 713 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 174 IPR013320 -
Aed4g1236 713 Gene3D SH2 domain 603 711 IPR036860 -
Aed4g1236 713 SUPERFAMILY SH2 domain 611 679 IPR036860 -
Aed4g1236 713 MobiDBLite consensus disorder prediction 420 458 - -
Aed4g1236 713 PANTHER SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR 11 713 - -
Aed4g1236 713 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 11 713 IPR001217 GO:0003700|GO:0006355|GO:0007165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Aed4g1236 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1236 - - gmx:100803169 1278.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1236 4 12568451 12581930 Aed4g1236 4 12568451 12581930 ECH