Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1149 ATGGAGATTTTCAAATGCTTCTACATCAAAAATCTTCTTGTTGCCTTCATGGTATTATCATCAGAAGTTCTAGCAATTGATCCTTACTCAGAAGCACTTCTCAGCCTAAAATCTGAGCTTGTAGATGCTGACAACAGCTTGCACAATTGGGTGGTGCCCTCTGGAGGAAACTCAACTGGGAAAAAATCCTATACTTGTTCTTGGTCAGGCATCCAGTGCAACAATGACTCAACAATTGTAACCTCAATAGACCTCTCCATGAAAAAACTTGCAGGTGCAATAGTGTTAAGGAAGCAGTTCAACATCTTCACAAACCTCACTAGTCTCAACTTTAGCCACAACTTCTTCTCTGGGAACCTTCCACCTGAGATTTTCAACCTCACAAGCCTAACAATCTTGGACATAAGCAGAAACAACTTTTCTGGTCCATTCCCTAGTGGAATTCCAAGGCTCCAAAACTTGGTTATACTTGATGCCTTTAGCAACAGTTTTTCAGGTCCATTGCCTACTGAATTTTCACGCCTTACAAACCTTAAAATTCTCAACCTAGCTGGTAGCTACTTTAGAGGTTCAATTCCACCTGAATATGGCTCTTTCAAGAGCCTTGAGTTTCTTCATCTCGCAGGAAACTCTCTCACAGGAACCATTCCTCCGGAGCTTGGTAATCTGAAAACAGTGACACACATGGAGATTGGATACAACCTATACCATGGTTTCATTCCAAATGAATTAGGTGGCATGAGTCAGCTTCGCTATCTTGACATAGCAGGAGCTAATCTTTCTGGTTTTATACCAAAGCAACTCTCCAACCTCACCACTTTGCAGTCACTTTTCCTCTTCAGCAATCAGCTCAGAGGAACAATACCAAGTGAACTCAGCAACATTGAGACTCTCACTGATTTGGATCTCTCTGACAACTTCCTCACAGGTTCCATTCCTGAAAGCTTCTCAGAGTTAAAGAATTTGAGGCTTCTCAGTCTCATGTACAATGACATGAGTGGCACTGTTCCTGAAGCCATTGCAGAACTTCCATCATTGGAAACTCTTCTCATTTGGAACAACCAATTCAATGGATCACTTCCACAGAACTTAGGGAGGAACTCCAAACTCAAGTGGGTGGATGCTTCCACAAACGATTTATCTGGCATCATTCCACCTTCCATTTGTGTGAATAAAGAACTGTTTAAGCTCATCCTCTTTTCAAACAAATTCACCGGCGGTGTTTCGTCGATCTCCAATTGTTCTTCCATCGTTCGCCTTCGCCTCGAAGACAATTCACTCTCAGGAGAAATCACTTTGAAGTTCAGCCATCTTCCTGATATCTTGTATGTTGATCTCTCTAACAACAACTTTGTTGGTGGGATTCCCTCAGATATCTCTCAAGCCACTCAATTGGAGTATTTCAATGTCTCTTATAATCTCCAATTAGGTGGCAGCATCCCTTCAAAAACATGGTCCTTGCCACAGCTTCAGAATTTTTCAGCATCTTCTTGTGCTGTTTCTAGTGAAATTCCCCCATTCGAGTCTTGCAAAACAGTTTCAGTTATTGATCTAGACAACAATAACTTATCTGGAACCATCCCAAAGAGTGTTTCCAAATGTCAAGCTCTTGAGAAAATCAACCTATCCAACAACAATCTTTCAGGTCATATACCTGATGAGATTGCCACTATTCCTGTTCTTGGTGTAGTGGACTTATCAAACAATAGCTTCAATGGTCCCATACCTGCTAAGTTTGGTAGTTCATCAAGTTTACAACTTCTCAATGTGTCATTCAACAACATCTCTGGTTCAATTCCCACAACAAAATCCTTCAAATTGATGGGAAGAAGTGCATTTGATGGGAATTCAGAGCTATGTGGAGCACCATTGAGAGCATGTCCTGATTCAGTTGGCATATTTGGCAGCAAAGGCGTGTGGAAGGTTACACGTGTCACGCTACTCTCTATAGGGTTGCTAATAGTCCTCCTGGGACTTGCCTTTGGAATGTTTTATCTGAGAAGGGGAATCAAGAGTCAATGGAAGATGGTTTCATTTGTAGGATTGCCTCAATTCACATCAAATGATGTTTTGAAAAGCCTCACTGCCACTACAACAAATCCTACATCACCAACAGTTACAATTACAAAAGCTGTTTTGCCTACAGGAATAACAGTTTTGGTGAAGGGGATTGAGTGGGAAACAAGAAGCATCAAGGTTGTGTCAGAATTTATAATGAGACTTGGAAATGCAAGGCACAAGAATTTGATAAGATTGTTGGGGTTCTGCCACAACCAGCAACTGGTTTATCTTTTGTATGATCACTTGCCCAATGGAAATTTGGCTGAGAAATTGTTGGAAATGAAATGGGATTGGGCTGCAAAATTCAGAACAGTGGTTGGAATTGCAAGGGGACTTTGCTTCCTTCACCATGAGTGTTTCCCAGCTATACCCCATGGTGACTTGAAGCCAAACAACATTGTGTTTGATGAAAATATGGAACCCCATTTGGCAGAGTTTGGATTCAAACAAGTGTTGAGATGGAGCAAAGGCTCATCACCCTCCACAACAAAGTGGGAAACAGAATATGATGAAGACACAAAACAAGAACTGTGCATGGACATCTACAAATTCGGGGAGACCATTCTGGAAATCTTAACTGGTGGAAGGTTAGCAAATGCAGGAGGAGTCAGCAGCATACAAAGCAAGCCAAGGGAGGCTCTCCTGAGAGAAATGTACGACGAGAACAAAGCAACTTCTTCTGCAAGTTCATTGCAAGAGATCAAACTGGTTCTTGAGGTTGCAATGCTTTGCACCAGAAGCCGATCATCGGATCGGCCATCAATGGAAGATGTTCACAAGCTGCTGTCAGGGCTAAAGCACCTAGATGATGATGGCAGCAGAACTTCAAAAGAAGGGCATTTGAAATTTTCATTGGAAAGCATTAGAAACATATAG 2937 0.4178 MEIFKCFYIKNLLVAFMVLSSEVLAIDPYSEALLSLKSELVDADNSLHNWVVPSGGNSTGKKSYTCSWSGIQCNNDSTIVTSIDLSMKKLAGAIVLRKQFNIFTNLTSLNFSHNFFSGNLPPEIFNLTSLTILDISRNNFSGPFPSGIPRLQNLVILDAFSNSFSGPLPTEFSRLTNLKILNLAGSYFRGSIPPEYGSFKSLEFLHLAGNSLTGTIPPELGNLKTVTHMEIGYNLYHGFIPNELGGMSQLRYLDIAGANLSGFIPKQLSNLTTLQSLFLFSNQLRGTIPSELSNIETLTDLDLSDNFLTGSIPESFSELKNLRLLSLMYNDMSGTVPEAIAELPSLETLLIWNNQFNGSLPQNLGRNSKLKWVDASTNDLSGIIPPSICVNKELFKLILFSNKFTGGVSSISNCSSIVRLRLEDNSLSGEITLKFSHLPDILYVDLSNNNFVGGIPSDISQATQLEYFNVSYNLQLGGSIPSKTWSLPQLQNFSASSCAVSSEIPPFESCKTVSVIDLDNNNLSGTIPKSVSKCQALEKINLSNNNLSGHIPDEIATIPVLGVVDLSNNSFNGPIPAKFGSSSSLQLLNVSFNNISGSIPTTKSFKLMGRSAFDGNSELCGAPLRACPDSVGIFGSKGVWKVTRVTLLSIGLLIVLLGLAFGMFYLRRGIKSQWKMVSFVGLPQFTSNDVLKSLTATTTNPTSPTVTITKAVLPTGITVLVKGIEWETRSIKVVSEFIMRLGNARHKNLIRLLGFCHNQQLVYLLYDHLPNGNLAEKLLEMKWDWAAKFRTVVGIARGLCFLHHECFPAIPHGDLKPNNIVFDENMEPHLAEFGFKQVLRWSKGSSPSTTKWETEYDEDTKQELCMDIYKFGETILEILTGGRLANAGGVSSIQSKPREALLREMYDENKATSSASSLQEIKLVLEVAMLCTRSRSSDRPSMEDVHKLLSGLKHLDDDGSRTSKEGHLKFSLESIRNI 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1149 978 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Aed4g1149 978 Pfam Leucine rich repeat 513 570 IPR001611 GO:0005515
Aed4g1149 978 Pfam Leucine rich repeat 297 356 IPR001611 GO:0005515
Aed4g1149 978 Gene3D Transferase(Phosphotransferase) domain 1 769 970 - -
Aed4g1149 978 Gene3D Ribonuclease Inhibitor 28 150 IPR032675 -
Aed4g1149 978 SMART serkin_6 705 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1149 978 ProSiteProfiles Protein kinase domain profile. 674 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1149 978 SMART LRR_typ_2 271 295 IPR003591 -
Aed4g1149 978 SMART LRR_typ_2 199 223 IPR003591 -
Aed4g1149 978 SMART LRR_typ_2 343 367 IPR003591 -
Aed4g1149 978 SMART LRR_typ_2 103 127 IPR003591 -
Aed4g1149 978 Gene3D Phosphorylase Kinase; domain 1 704 768 - -
Aed4g1149 978 Gene3D Ribonuclease Inhibitor 239 353 IPR032675 -
Aed4g1149 978 Gene3D Ribonuclease Inhibitor 354 631 IPR032675 -
Aed4g1149 978 Pfam Protein tyrosine and serine/threonine kinase 716 949 IPR001245 GO:0004672|GO:0006468
Aed4g1149 978 Gene3D Ribonuclease Inhibitor 151 238 IPR032675 -
Aed4g1149 978 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 3 954 - -
Aed4g1149 978 SUPERFAMILY Protein kinase-like (PK-like) 708 949 IPR011009 -
Aed4g1149 978 SUPERFAMILY RNI-like 82 405 - -
Aed4g1149 978 SUPERFAMILY RNI-like 312 600 - -
Aed4g1149 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Aed4g1149 978 PANTHER UNNAMED PRODUCT 3 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1149 Aed-Chr4 10980719 10984402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1149 13 950 Receptor kinase-like Gene Family AT5G51350 53.171 0.0 935
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed4g1149 PK_Tyr_Ser-Thr 1.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1149 - - gmx:100782323 1590.86