Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1106 ATGACTTCACGCTCGTTAGGGCAGGGGAGCAGCGGCGGAGGCGGGAGCAGCAGCAGGACCCGTGTGGGGAAGTACGAAGTGGGTCGGACCCTGGGTGAGGGCAATTTCGCCAAAGTGAAATTTGCGAGGCACGTGGAAACTAAAGAGAACGTCGCCATCAAGATTCTCGACAAGGAGAAACTTCTCAAACACAAAATGATTGCCCAGGGATGTTCTGGTTTCTTGGAAACCGTGAAAGGTTTCACGCGTTTGGGGTCATGTGGAAAAAGTCAAATCAGCAGTGATATAAAACGGGAAATATCAACAATGAAACTGATTAGACATCCTAATGTCATACGTATGTATGAGGTAATGGCTAGCAAAACAAAGATATACATTGTATTGGAATTTGTGACTGGCGGGGAGCTGTTTGATAAAATTGCACGCAGCGGGAGGTTGAAAGAAGATGAAGCAAGAAAATATTTTCAACAGCTTATATGTGCGGTGGATTACTGTCACAGTAGAGGTGTTTCCCATAGAGACCTAAAGGAAGATGGGCTACTTCACACAACATGCGGTACGCCAAATTATGTTGCTCCAGAGGTGATTCACAACAAAGGTTATGATGGGGCAAAGGCAGATTTATGGTCATGTGGTGTTATTCTCTTTGTTTTAATGGCTGGCTATTTGCCCTTTGAAGAAACCAATCTATCAGCTTTATATAAAAAGGTGATTTCTACTCCATACCTAGTTCTTTCTGTTCACCTGGCTGAACTCGGCTCAGGTTATTCTGATGTAGCTGTTGGAGAGCATAACAACTTGATCTTCTCAAACATTTACTATTGTTATACTCTTTGTATTTTCAAGGCTGAGTTCACATGTCCTCCATGGTTCTCTTCAAGTGCAAAGAAGCTAATCAACAGAATCCTTGATCCCAATCCCACCACTCGGATTACATTTGCTGAGATCATTGAGAATGACTGGTTCAAGAAGGGATATAAGCCTCCCGTATTTGAACAGAATAATGTTACTCTTGATGATGTAGATTCTGTTTTCAGTGATTCTGTGGATTCACAAAATCTTGTTGTAGAGAGGCGCGAAGAGGGGCCTCTGGGTCCTGTGGCACCTGTGACTATGAATGCCTTTGAACTTATCTCTAAATCTCAGGGCCTCAATCTTAGTAGTCTTTTTGAGAAGCAAATGGGACTTGTTAAAAGGGAAACACGATTCACATCCAAAAGTTCAGCAGATGAAATCATTTCAAAAATTGAGCAAGCTGCAGGACCCCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGATTCAAGGGGAAAAGACTGGAAGAAAAGGTCATCTATCTGTAGCCACTGAGTTCTACAAAAATCTTGCTACTGGGCTGAAAGATATTGTTTGGAAAGCCGAGCCAATCGATGAAGAAATAGATGGTGCCCATGGATCAAAATAA 1449 0.4237 MTSRSLGQGSSGGGGSSSRTRVGKYEVGRTLGEGNFAKVKFARHVETKENVAIKILDKEKLLKHKMIAQGCSGFLETVKGFTRLGSCGKSQISSDIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIARSGRLKEDEARKYFQQLICAVDYCHSRGVSHRDLKEDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGYLPFEETNLSALYKKVISTPYLVLSVHLAELGSGYSDVAVGEHNNLIFSNIYYCYTLCIFKAEFTCPPWFSSSAKKLINRILDPNPTTRITFAEIIENDWFKKGYKPPVFEQNNVTLDDVDSVFSDSVDSQNLVVERREEGPLGPVAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKSSADEIISKIEQAAGPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEFYKNLATGLKDIVWKAEPIDEEIDGAHGSK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1106 482 CDD CIPK_C 373 455 - -
Aed4g1106 482 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Aed4g1106 482 MobiDBLite consensus disorder prediction 1 22 - -
Aed4g1106 482 Pfam NAF domain 369 429 IPR004041 GO:0007165
Aed4g1106 482 PANTHER SERINE/THREONINE KINASE 270 472 - -
Aed4g1106 482 PANTHER SERINE/THREONINE KINASE 178 240 - -
Aed4g1106 482 PANTHER SERINE/THREONINE KINASE 92 176 - -
Aed4g1106 482 Gene3D Transferase(Phosphotransferase) domain 1 131 179 - -
Aed4g1106 482 ProSiteProfiles Protein kinase domain profile. 25 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1106 482 Gene3D Transferase(Phosphotransferase) domain 1 180 253 - -
Aed4g1106 482 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 69 - -
Aed4g1106 482 SUPERFAMILY Protein kinase-like (PK-like) 22 344 IPR011009 -
Aed4g1106 482 SMART serkin_6 25 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1106 482 Gene3D Phosphorylase Kinase; domain 1 15 130 - -
Aed4g1106 482 MobiDBLite consensus disorder prediction 1 18 - -
Aed4g1106 482 ProSiteProfiles NAF domain profile. 367 391 IPR018451 GO:0007165
Aed4g1106 482 Pfam Protein kinase domain 25 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1106 482 Pfam Protein kinase domain 182 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1106 482 Gene3D Transferase(Phosphotransferase) domain 1 264 364 - -
Aed4g1106 482 PANTHER SERINE/THREONINE KINASE 19 69 - -
Aed4g1106 482 Gene3D Kinase associated domain 1, KA1 367 467 - -
Aed4g1106 482 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 270 472 - -
Aed4g1106 482 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 178 240 - -
Aed4g1106 482 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 92 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1106 Aed-Chr4 10376859 10385787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1106 9 474 CBL-interacting serine-threonine protein kinases AT1G01140 51.336 1.45e-178 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed4g1106 Pkinase 7.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1106 - - gmx:100788746 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1792 6 21324884 21328181 Aed4g1106 4 10376859 10385787 PCT