Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1097 ATGAGCAAAATATCTGAGTTTTCTGATGTGTGTGGAGTCAAAGCTTGCATGATCATGTATGATGGCAATGGTAGTGATGCTCCACCATTGACTTGGCCACAAGACCCTATTGAGGTGAACTCCATCATTGAAAGGTATGAGAGCATAAAGAATGAGAAGCTTCCCAAGAAATTTGATCTCAACAACTTCTTTGAGATTAGGAAGAACATGGTTGACATTGAGATTTCCAAAGTTCAAAAAGAGACCCTCAAGATAAAGTTTCCAACTTGGCATGCAAGCTTCAACAACCTAGGAGTAGAGGATCTGAGGAGTTTCATAGATATGTTGGACATGAAGCTTGAAGCTTGTAATCAAAGAGTTGAGATGTCAAAACACAACAACAACAACTTCAATCTCATGCAAAAAATCTCTCAAAGTCAATTTTCTCTTAATGATGGTAACCATTTGGTAGCACCTTACCTACTTAATCATCTTGATCATAAAGGTTCTAGTTCTCATCAATCCCAACAACAAATGCTTAGCTTTGATCCAAATCTTATGCAATTGATGATTGCAAAGAGTAATGGGATGGTGGATGATATTAGTACTACTAATCAAGTTGTTGATGTGCCTATGGATTTTGCAAATCTAGGAAACTCTACTAATCATCAATTTGATGAGTCTTTGGACTATTTTAGCCAACTTGATCAAATTGAGGATTTGGCTAGTAGCCAACTTGATGAGAAAGTGAATTGGACTAATCAACAACAACATCATGGTGTGGTAGTGATTGGTGCAATGAATGGTGCTATTACTAATTATGATAATGCAAGGTTTTGTGGAGATGATGAACACAACCACCAATTAGAGGCCTCACTTTGCAATTACAATAATGGAGCACTTGTGCAACCAATGCAACAACCCTTTAACTATGATGCAGCAATATTGCAGAATAATACTGCTTCTTCTCAGTCAAAGATGAATGTGCAGCAAATGGATGAACTTCAGACAGATCATCACTACAACAACAACAACAAGCTTCAAAATGAGTTATCCAACCACTTCATTTAG 1050 0.3714 MSKISEFSDVCGVKACMIMYDGNGSDAPPLTWPQDPIEVNSIIERYESIKNEKLPKKFDLNNFFEIRKNMVDIEISKVQKETLKIKFPTWHASFNNLGVEDLRSFIDMLDMKLEACNQRVEMSKHNNNNFNLMQKISQSQFSLNDGNHLVAPYLLNHLDHKGSSSHQSQQQMLSFDPNLMQLMIAKSNGMVDDISTTNQVVDVPMDFANLGNSTNHQFDESLDYFSQLDQIEDLASSQLDEKVNWTNQQQHHGVVVIGAMNGAITNYDNARFCGDDEHNHQLEASLCNYNNGALVQPMQQPFNYDAAILQNNTASSQSKMNVQQMDELQTDHHYNNNNKLQNELSNHFI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1097 349 PANTHER MADS BOX PROTEIN 2 206 - -
Aed4g1097 349 SUPERFAMILY SRF-like 1 57 IPR036879 GO:0003677|GO:0046983
Aed4g1097 349 PANTHER PROTEIN, PUTATIVE-RELATED 2 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1097 Aed-Chr4 10285572 10286621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1097 3 119 Type I MADS-box Gene Family AT5G55690 28.926 1.53e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1097 - - ccaj:109791338 288.115