Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1078 ATGGAGATGCCAACCAAGATAGTATCTAATGGCATATGGGGTAGCACAACTTATGGCGCTTTACTTTCAAGAGCCACAATGCCAGTGTTGGAGCATCAAATTCTTGCCATTTTTCTTATCACACAATGCCATTCTTTGAAGATAGAGGCATTGAGCAAGTATAAAATGGTGTTGTTCCCTTATGGGAGTAAAGACATATTGAATGTAGTATCAGGATTTGGATATGCATGCTTCCTATTTCTAAACAAGGTGAAAATGGATTTCAGCATGATAACTAGAACTGGGAAGAAAGCTTGGACAATCGCTCTTTCCTCCTTAGTAATTCCAACAATTATTGGTCTCTTAGTATGCTACATTTTCATGGGACACGCACAAAAAACCCTAGGAGAGTTCGAGGGAGGAAGACTTCCCGTGATAATAATAGGCCACAGTGGGTGTTCCTTCCCTGTGGTAGCTTCTCTACTATCTGATCTTGAGATTTTGAACTCTGAACTTGGACGCTTAGCACTCTCGGCAACACTTGTTATAGATGTGATAAGCGAAGTTGTGACAGGATTAGGCACTACTATTACGAGCAGCCTTACACTCGATTCTCATAATCATAACCAAGGGAATGAACCTAAACTTGCACTTTATACTGTTACAAAATACTTTATTTTCGTGACATTTACGATTGTGATTGCACACCTTGCAATGAGGTGGATTGTGAGGTTTTTTGTGGTGTGGGCTAATCAAACTGTGTTAGGTGGGATGTTACTTTTCGGTCTTTTTGTTCCAGAAGGTCCTCCATTTGGCTCTGAATTGGTCAAACAGTTTGAGTTGTTCAACACATGGTTCCTTTTGCCAATCTTTGTCACATGTTGTGCCATGAAGGTTGATATTTCCACGCATAAGAGTTGGACATTGGTTCTCCTTGTGATAACCATAATTGTTGTTTTGCATTTGGTTAAGATGCTTATAACTATTGGAATTTGTCGTTATTGCAAAATGCTTAAAATAGACGGTTTATGTCTTGCTCTCATGTTGAGTTGCAAAGGTGTCGTCGATTATGTCACTTACATCTTTCTATTTGATTCCATGTTAATGAGTAATGAAACAATCTCTATGATGGCCATATCAGTGTTGGTGTTAGGAAGCATTACACGTGTTGGGGTGAAATCCTTATACGACCCAACAAGGAAATATGCAAGCTATCAAAAAAGGAACATAATGAACATGAAACCTAACTCAGAGCTTTGA 1239 0.3906 MEMPTKIVSNGIWGSTTYGALLSRATMPVLEHQILAIFLITQCHSLKIEALSKYKMVLFPYGSKDILNVVSGFGYACFLFLNKVKMDFSMITRTGKKAWTIALSSLVIPTIIGLLVCYIFMGHAQKTLGEFEGGRLPVIIIGHSGCSFPVVASLLSDLEILNSELGRLALSATLVIDVISEVVTGLGTTITSSLTLDSHNHNQGNEPKLALYTVTKYFIFVTFTIVIAHLAMRWIVRFFVVWANQTVLGGMLLFGLFVPEGPPFGSELVKQFELFNTWFLLPIFVTCCAMKVDISTHKSWTLVLLVITIIVVLHLVKMLITIGICRYCKMLKIDGLCLALMLSCKGVVDYVTYIFLFDSMLMSNETISMMAISVLVLGSITRVGVKSLYDPTRKYASYQKRNIMNMKPNSEL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1078 412 Gene3D - 14 397 IPR038770 -
Aed4g1078 412 Pfam Sodium/hydrogen exchanger family 64 254 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed4g1078 412 PANTHER CATION/H + ANTIPORTER 48 237 - -
Aed4g1078 412 PANTHER CATION/H+ EXCHANGER 2 236 412 - -
Aed4g1078 412 PANTHER CATION/H+ EXCHANGER 2 48 237 - -
Aed4g1078 412 PANTHER CATION/H+ EXCHANGER 2 1 47 - -
Aed4g1078 412 PANTHER CATION/H + ANTIPORTER 236 412 - -
Aed4g1078 412 PANTHER CATION/H + ANTIPORTER 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1078 Aed-Chr4 10110934 10114367 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1078 38 412 Antiporter Super Family AT3G44900 29.440 6.27e-43 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1078 - - gmx:100778180 608.601