LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g1075	ATGGATCGAGAAAATGGCGACGGCGACATTGAAGGCGGTGGCAGCGACGACGGCGGTTTCCGCTCTCCGATGGGCCGCAAGTACCGCCCTGTCTTGGCCAACGATCGCGCCGTGCTCGAAATGTCCTCCATGGATCAGGGATCTGCTTCCTCTTCCTCCTCCGCCGCATTTCCTGATCCACCTTCCAATCTCAGAAAAGTAAATACGGGTGTGAGTGGGAGTTCGGATGCTAATGCTAAAGAGGGGAACAATTCTCATCAACAGCAACCTAATGGATCCCAGCAGCAGGAATCTAAACTGGAGCTGTTCGGTTTTGATTCACTTGTCAACATTCTGGGCCTCAAAAGTATGACTGATGAGCAAGTTGCACCACCATCTAGCCCCAGAGATGGTGAGGATATATCCATCACTGCTGGCTTGCCAAAGCCTGCTGCTCCCAAACTGGGTACACTGATGGGTGTATTTATTCCATGTATACAAAGCATTTTGGGCATCATCTACTACATTCGTTTCACTTGGATTGTTGGTATGGCTGGCATAGGAGAGACATTGTTGCTTGTTTCTTTATGTGGCACTTGTACATTCCTTACTTCAATATCATTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCTTACTATCTCATAGGCCGTGCCCTTGGTCCTGAAGTTGGAGTTAGCATTGGTCTATGCTTCTTCCTTGGAAATGCTGTTGCCGGAGCACTTTACGTATTGGGAGCTGTAGAAACATTTTTGAAAGCAGTCCCTTCTGCTGGGATTTTTAGAGAGACTGTCACTCATGTTAATGGTACTGCAGTTGCACAACCGATAGAGAGTCCAAGTTCTCATGATTTGCAAATATATGGGATTGTTGTGACTATTCTGTTATGCTTTATTGTATTTGGAGGAGTGAAGATGATAAATCGGGTTGCGCCTGCTTTTCTCATACCTGTTATATTCTCAGTAATCTGCATATTTTTGGGAGTTCTTATGGCAAGCAAGGATCATCCTTCAGAGGGAATCACTGGGTTGAGTTCCAAGACATTTAGTGATAATTGGAGTTCAGATTATCAAAAGACTAATGATGCTGGAATTCCAGAATCTGATGGTTCGGTAACCTGGAATTACAATTCATTGGTAGGACTCTTTTTCCCTGCTGTGACGGGAATAATGGCAGGTTCTAATCGATCATCCTCTCTGAAAGATACTCAGCGATCAATTCCTGTTGGAACTTTAGCTGCAACTCTTACAACTACTCTTCTATATCTTGTTTCTTTGATGTTGTTTGGTTCTGTTGCTACCAGAGAGGAGCTTTTAACTGACAGGCTACTTACAGCTACAATTGCCTGGCCTTTTCCTTCATTAATTAAAATTGGAATTATTCTTTCAACTATGGGTGCTGCTCTTCAGAGCCTGACTGGTGCCCCACGTCTGCTTGCAGCAATAGCCAATGATGACATTTTACCCATTTTGAACTACTTTAAAGTTGCAGATGGCGGTGAACCACATGTTGCTACCTTTTTTACTGCTTTCTTATGTATTGGGTGTGTCATTATTGGGAATCTGGATCTTATCACTCCAACTGTAACTATGTTTTTCCTTCTATGTTACACTGGTGTCAACTTATCATGCTTCCTTCTCGATCTTCTAGATGCCCCTAGTTGGCGTCCCCGGTGGAAATTTCACCATTGGAGTATGTCCCTTTTGGGAGCATTACTTTGCATAGTGATCATGTTTCTAATTTCTTGGTCATTCACTGTGGTGTCTTTGGCCCTTGCAAGCCTCATATATAAGTACGTGAGCATTAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGTGCTTATTTCCAACTGGCACTTCGCAGCCTTCGGTCCCTAGGAGCAAGCCAAGTGCACCCCAAGAATTGGTATCCAATTCCACTGATATTTTGCCGACCCTGGGGCAAATTGCCAGAAAATGTTCCCTGTCATCCCAAACTCGCAGATTTTGCTAACTGTATGAAGAAGAAAGGTCGAGGAATGTCCTTATTTGTCTCTATACTGGATGGGGATTACCATGAATGTGCCGAAGATGCCAAGGCTGCTTGCAAACAACTTAGCACTTACATTGATTACAAAAATTGTGAAGGTGTGGCTGAGATTGTTGTCGCCCGTAACATGTCTGATGGCTTTCGTGGCATTATTCAGACAATGGGCCTCGGCAATCTCAAGCCGAACATTGTAGTGATGCGTTACCCGGAGATTTGGCGTAGGGAAAACTTGACAGAAATCCCTGCCGTCTTTACCGGGATAATTAATGATTGCATTGTTGCAAACAAGGCTGTGGTTATAGTCAAGGGTCTCGACGAGTGGCCAAATGCGTACCAGAGGCAGTATGGCACAATTGATTTGTATTGGATCGTGAGAGACGGTGGTCTCATGCTGCTCCTCTCTCAGCTCCTTCTTACCAAGGAGAGCTTTGAGAATTGCAAGATTCAGGTCTTTTGCATTGCAGAAGAGGATTCAGATGCAGAGGGGCTGAAAGCTGACGTGAAGAAATTCCTCTATGACCTTCGGATGCAAGCAGAAGTCTTTGTCATAACAATGAAATGGGACGCACAGATGGACAGCAGCGGTGGGTCTCCGAATCCAGTAGATGAGTCAATGGAGGCATTCACCAGTGCTCAGCAAAGAATCGACAATTACCTAACCCAGATGAAAGCGATGGCAGAGAGAGAAGGCACTCCTCTAATGGCAGACGGCAAGCCCGTGGTTGTGAACGAGAAGCAGGTTGAAAAGTTTCTCTACACGACACTGAAGCTCAACTCGACGATTTTGAGATATTCGAGAATGGCAGCTGTTGTGTTGGTGAGTCTGCCTCCACCTCCGGTGAGCCACCCGGCATATTTCTACATGGAGTACATGGATCTGTTGCTGGAGAAAATACCAAGGATTTTGATTGTAAGAGGGTATCGTAGAGACGTTGTAACTCTATTCACATAG	2997	0.4525	MDRENGDGDIEGGGSDDGGFRSPMGRKYRPVLANDRAVLEMSSMDQGSASSSSSAAFPDPPSNLRKVNTGVSGSSDANAKEGNNSHQQQPNGSQQQESKLELFGFDSLVNILGLKSMTDEQVAPPSSPRDGEDISITAGLPKPAAPKLGTLMGVFIPCIQSILGIIYYIRFTWIVGMAGIGETLLLVSLCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETVTHVNGTAVAQPIESPSSHDLQIYGIVVTILLCFIVFGGVKMINRVAPAFLIPVIFSVICIFLGVLMASKDHPSEGITGLSSKTFSDNWSSDYQKTNDAGIPESDGSVTWNYNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLTTTLLYLVSLMLFGSVATREELLTDRLLTATIAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGGEPHVATFFTAFLCIGCVIIGNLDLITPTVTMFFLLCYTGVNLSCFLLDLLDAPSWRPRWKFHHWSMSLLGALLCIVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSLFVSILDGDYHECAEDAKAACKQLSTYIDYKNCEGVAEIVVARNMSDGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPAVFTGIINDCIVANKAVVIVKGLDEWPNAYQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFENCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVFVITMKWDAQMDSSGGSPNPVDESMEAFTSAQQRIDNYLTQMKAMAEREGTPLMADGKPVVVNEKQVEKFLYTTLKLNSTILRYSRMAAVVLVSLPPPPVSHPAYFYMEYMDLLLEKIPRILIVRGYRRDVVTLFT	998

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g1075	998	MobiDBLite	consensus disorder prediction	119	138	-	-
	Aed4g1075	998	MobiDBLite	consensus disorder prediction	41	97	-	-
	Aed4g1075	998	Pfam	Solute carrier family 12	663	784	IPR018491	GO:0006811\|GO:0016020\|GO:0022857
	Aed4g1075	998	Pfam	Solute carrier family 12	795	997	IPR018491	GO:0006811\|GO:0016020\|GO:0022857
	Aed4g1075	998	Pfam	Amino acid permease	153	629	IPR004841	GO:0016020\|GO:0055085
	Aed4g1075	998	PANTHER	CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1	19	997	-	-
	Aed4g1075	998	TIGRFAM	2a30: K-Cl cotransporter	84	998	IPR004842	GO:0006811\|GO:0015377\|GO:0016021
	Aed4g1075	998	MobiDBLite	consensus disorder prediction	1	97	-	-
	Aed4g1075	998	Gene3D	Amino acid/polyamine transporter I	146	611	-	-
	Aed4g1075	998	PANTHER	SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS	19	997	IPR004842	GO:0006811\|GO:0015377\|GO:0016021

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed4g1075	148	998	Inorganic Solute Cotransporters	AT1G30450	81.946	0.0	1440

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g1075	K14427		-	gmx:100795205	1748.79

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed4g1075	4	10071146	10084526	Aed4g1075	4	10071146	10084526	ECH