Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1051 ATGGAAGATAAAGCTGCGATAAAAAAATTGCTGGAAAATGAGGAAAAGCCATGCGATAATACTATGGGATCTACTCTTCTGAGTTTGAGGCTGAATAACTCAGAACAACCCCTTAACCAAACGGGGATGCTGCGAATGAAGCTTGAGGAAGCGAAGAAAGAGAATGAGAATTTAAAGGCTATGCTGAATCAAGTTAATGAACACTGCACTGTTCTTCAAAATCGCATACTTTTTGAGATTCAGCAGCATCAACTATCTTCATCTTCATCACCTCACAATAGTAATAATAATAATCACTCGCAGGGAAATATTAATAGACATGATGGGGATCAGAAACCAATGCAACTACACACTCGAGAGTTTTTAAATATTGGCGAGTCTTCATCAATTTTAGATGGCAACACAGAAAACGTTGAAACAAAAATATTATTAGGCAAAAAAAACATTGCAAGTGATGATCAAGGTGGTGAAATCAACAGCCAAATAACATCTCATGAAGCAAAAAGCACAGATCTTTTAGATCAACCATCTGAGGTTGCTTTCAGGAGAGCTAGAGTGTCCATAAGAGCACGATCAGATTTTTCTTTGATGGGCGATGGGTGTCAATGGAGAAAGTACGGACAAAAGACAGCGAAAGGAAACCCTTGTCCTCGAGCCTACTACCGTTGCAGCATGGGTACTGCATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTTTTAAGGATGAGACTGTTGTCATAACAACCTACGAAGGAAACCACAACCATCCACTCCCACCAGCAGCAAGACCATTAGCAAGCTCAACATCATCAGCACTCAACATGTTCCTCTCTGGCTCAATCACAAGCTCATCACAACATATCAACACCACCACTCTCACAAACTCATCACCCCTCTTCTCTAGTACCACTATTTCCCCAACAACTGCTATAGCTACTTTCTCCCAAAATGCAACATGCCCCACAGTAATCCTAGACCTAACCCACCGCAACAACAACAACAACAACAACAACTATCTCCAATTCCAAAGAACCACTACCACTTCTTCACAACAACAACAACAACCACTGTTCCCTCTTCCACTTCATGGCCACCACTTGTGGTCTAATAAGGTTCCAAGTATTCCAACCATGTTAGCCACCACCCCAGTTGAGAACAAAAGCCTTGCCCTAGTTGATGTTGTGAGTGAGGCTATAACCAAAGACCCTTCTCTCAAAGCAGCATTGTTTTCAGCCATTTCTTCACTCACTAGTACTACTGGAGATAATCCTCATGAGAAGAACAACAACAATAACCAAAGCCAACCACATAGTACTAAGAGTAGTGGTGGTGGTTATGACCCTTGTTCTAAGTTGCCTGCAATATTGATATAG 1371 0.4165 MEDKAAIKKLLENEEKPCDNTMGSTLLSLRLNNSEQPLNQTGMLRMKLEEAKKENENLKAMLNQVNEHCTVLQNRILFEIQQHQLSSSSSPHNSNNNNHSQGNINRHDGDQKPMQLHTREFLNIGESSSILDGNTENVETKILLGKKNIASDDQGGEINSQITSHEAKSTDLLDQPSEVAFRRARVSIRARSDFSLMGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVVITTYEGNHNHPLPPAARPLASSTSSALNMFLSGSITSSSQHINTTTLTNSSPLFSSTTISPTTAIATFSQNATCPTVILDLTHRNNNNNNNNYLQFQRTTTTSSQQQQQPLFPLPLHGHHLWSNKVPSIPTMLATTPVENKSLALVDVVSEAITKDPSLKAALFSAISSLTSTTGDNPHEKNNNNNQSQPHSTKSSGGGYDPCSKLPAILI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1051 456 MobiDBLite consensus disorder prediction 418 444 - -
Aed4g1051 456 ProSiteProfiles WRKY domain profile. 192 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g1051 456 Pfam WRKY DNA -binding domain 199 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g1051 456 Coils Coil 41 75 - -
Aed4g1051 456 Gene3D WRKY domain 182 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g1051 456 MobiDBLite consensus disorder prediction 84 111 - -
Aed4g1051 456 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 11 435 - -
Aed4g1051 456 SUPERFAMILY WRKY DNA-binding domain 190 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed4g1051 456 MobiDBLite consensus disorder prediction 84 108 - -
Aed4g1051 456 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 435 IPR044810 GO:0003700
Aed4g1051 456 SMART WRKY_cls 197 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed4g1051 456 MobiDBLite consensus disorder prediction 418 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1051 Aed-Chr4 9802225 9806781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1051 44 327 WRKY Transcription Factor Family AT4G04450 38.889 3.58e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed4g1051 WRKY 1.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1051 - - gmx:100781603 530.791