Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1046 ATGGTGATTTTAAACCTTGGGAGAAAAGAGGGACTGGGAATGCGACTTGGGAAATACGAGTTGGGAAAGACTCTTGGAGAGGGCAACTTTGGAAAGGTTAAGCTGGCAAGGGACACTGATTCTGGCAAGCTTTTTGCTGTTAAGATCCTTGACAAGAGCAAGATCATTGTTCTCAATAACACTGATCAGATAAAGAGGGAAATATGCACCTTGAAGCTTCTGAAGCATCCAAACGTGGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGGTACTTGAGTACGTGAATGGAGGAGAGTTATTTGACAAAATTGCAGATGGGTTGCTACATACAACATGTGGAAGTCCTAATTATGTTGCTCCTGAGATTCTTGCCAATAAAGGCTATGATGGTGCAACATCAGATATATGGTCATGTGGTGTTATCTTGTATATACCAAGATGGCTCTCACCTGGCTCTCAAAACATTATAAAGAGAATGCTCGATCCCAATCCTAAAACGCGGATAACAATGGCTATGATCAAAGAAGATGAATGGTTCAAGGAGGGTTATACTCCTGCAAATCCAGAAGATGAGGAAGAGGGTGTGTATGTTGATGATGAAGACTTTTCCATCCATGATGTGTCACTTGAAGCAGATCAAGGGAGTCCAAGATCACCAACACTTATTAATGCATTTCAATTGATATCAATGTCTTCCAGCCTAGATCTCTCTGGCCTTTTTGAGCAAGAGGATGTTTCTGAGAGGAAGATAAGATTTACATCCATCCATTCACCAAAAGATTTGGTTGAGAAGATAGAAGACATTGTAACAGAAATGGGATTTAGAGTCCAGAAGAAAAATGGGATGTTGAAAGTGATACAAGAGATCAAAGAACAGTATTGTCTAGATAATCTCTCAGTGGAAGCAGAGGTGTTTGAAATAAGTCCATCCTTGTATGTAGTAGAGTTAAGTAAGTCTTGTGGAGATGCTTCGGTATATAGACAGTTATGCAAGAAGTTATCAAATGATTTGGGTGTTCACACAAAGCAACAGCTAGGGAACTCAGAAGTGATAGCCTGA 1074 0.3985 MVILNLGRKEGLGMRLGKYELGKTLGEGNFGKVKLARDTDSGKLFAVKILDKSKIIVLNNTDQIKREICTLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKIADGLLHTTCGSPNYVAPEILANKGYDGATSDIWSCGVILYIPRWLSPGSQNIIKRMLDPNPKTRITMAMIKEDEWFKEGYTPANPEDEEEGVYVDDEDFSIHDVSLEADQGSPRSPTLINAFQLISMSSSLDLSGLFEQEDVSERKIRFTSIHSPKDLVEKIEDIVTEMGFRVQKKNGMLKVIQEIKEQYCLDNLSVEAEVFEISPSLYVVELSKSCGDASVYRQLCKKLSNDLGVHTKQQLGNSEVIA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1046 357 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Aed4g1046 357 PANTHER CBL-INTERACTING PROTEIN KINASE 21 13 109 - -
Aed4g1046 357 PANTHER CBL-INTERACTING PROTEIN KINASE 21 110 149 - -
Aed4g1046 357 Gene3D Transferase(Phosphotransferase) domain 1 110 226 - -
Aed4g1046 357 CDD CIPK_C 228 339 - -
Aed4g1046 357 Gene3D Kinase associated domain 1, KA1 227 344 - -
Aed4g1046 357 SUPERFAMILY Protein kinase-like (PK-like) 16 230 IPR011009 -
Aed4g1046 357 ProSiteProfiles Protein kinase domain profile. 19 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1046 357 ProSiteProfiles NAF domain profile. 222 246 IPR018451 GO:0007165
Aed4g1046 357 PANTHER - 13 109 - -
Aed4g1046 357 PANTHER - 149 348 - -
Aed4g1046 357 PANTHER - 110 149 - -
Aed4g1046 357 Pfam Protein kinase domain 113 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1046 357 Pfam Protein kinase domain 19 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1046 357 Gene3D Phosphorylase Kinase; domain 1 14 109 - -
Aed4g1046 357 Pfam NAF domain 224 283 IPR004041 GO:0007165
Aed4g1046 357 PANTHER CBL-INTERACTING PROTEIN KINASE 21 149 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1046 Aed-Chr4 9723425 9730549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1046 110 349 CBL-interacting serine-threonine protein kinases AT3G17510 58.955 1.10e-94 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed4g1046 Pkinase 2.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1046 K07198 - gmx:100815660 561.222