Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1011 ATGGCACTTTCTTCAAAGAAAGAGTTCTCTCAAACAACACCAACACCATACACTATCACACTCATCTTCTTCTTCGTTGTGCTTTCTCCGAGCCTCTGCGCCGTCGCACTTGGCAGCACCAACACCGTGGGATCGGAGTTGCTGAAGGTTTCTCCCTCCGAGTTCGCGGGGACGGTGAGAACCGTCTTTGAAGTGTTGCAAGATGTCGCCTCTATTCTCTCCGAGTTCGGTTCCGGCTTCGGAGATTCGCGTCTCACTAACGCCGTCTCCGACTGTCTCGATTTGCTCGACATGTCCTCCGATGAACTCGACTGGTCTGTCTCCGCTACCCAGAGTCCCCGAGGTAAACATAACAGTACAGGGAACACAGGTTCGGATTTAAGAACATGGCTAAGCGCAGCGCTTGCGAACCAAGACACATGCATGGACGGGTTCGACGGAACCAACGGCATAGTGAAGGGTCTAGTATCCAGCGGTCTAGGCCAAGTGATGTCGCTGCTGCAAGAGCTTCTCACACAGGTGAACCCTGTTTCGGACCACTTCTCTTTCTCTTCACCACAGGGCCAGTTCCCTTCGTGGGTTAAACCAGGGGAAAGAAGAAAGCTTCTCCAGACAGCAAATAGAGTGCGTTTCGACGCGGTGGTGGCCGCCGATGGGTCCGCTAACTTCACCACGGTCATGGACGCGGTGTTGTCTGCGCCTAATTACAGCATGAAAAGGTATGTGATATATATAAAGAAGGGTGTTTACCATGAGAATGTTGAGATAAAGAAGAAGAAGTGGAACCTTATGATGATTGGAGATGGCATGGATGCTACTGTAATTTCTGGGAACCGGAGCTTCATTGATGGTTGGACAACGTTCCGGTCAGCTACCTTTGCTGTGAGTGGCAGAGGATTCATAGCACGAGACATTACCTTCGAGAACACGGCAGGACCAGAAAAGCACCAAGCAGTGGCGCTAAGATCAGACTCCGATCTCTCAGTATTCTTCCGATGTGCAATCTCCGGTTACCAAGACAGCCTCTACACTCACACCATGCGCCAGTTCTACAGAGAGTGCAAAATCAGCGGCACCGTCGACTTCATCTTCGGCGACGCCACCGCCATCTTCCAAAACTGCCACATCTCAGCCAGAAAAGGGCTACCAAATCAAAAGAACACAATCACAGCACACGGCAGAAAAACTGCCGATGAACCAACCGGTTTCTCGATCCAGTTCTGCAACATCTCGGCCGATTACGACCTCGCCGCGAACTCGAATAACACAGACTCTAACTCCACCACCACCCACACGTACCTTGGCAGGCCGTGGAAACCGTACTCCAGGACGATTTTCATGCAGTCTTACATCGGTGATGTGCTGAGGCCGGAAGGGTGGTTGGAGTGGGATGGCGATTTTGCTTTGGACACTTTGTACTATGCTGAGTACATGAACTATGGGCCCGGTGCTGGTGTGGCTAGCCGTGTGAAATGGCCAGGGTTCCATGTCATGAATGATTCTAGGCAGGCTAGTAATTTCACGGTTTCGCAGTTCATCGAGGGGAATCTTTGGTTGCCTTCGACCGGTGTAACGTTCACCGCGGGATTTGGAGGCGTATGA 1602 0.5162 MALSSKKEFSQTTPTPYTITLIFFFVVLSPSLCAVALGSTNTVGSELLKVSPSEFAGTVRTVFEVLQDVASILSEFGSGFGDSRLTNAVSDCLDLLDMSSDELDWSVSATQSPRGKHNSTGNTGSDLRTWLSAALANQDTCMDGFDGTNGIVKGLVSSGLGQVMSLLQELLTQVNPVSDHFSFSSPQGQFPSWVKPGERRKLLQTANRVRFDAVVAADGSANFTTVMDAVLSAPNYSMKRYVIYIKKGVYHENVEIKKKKWNLMMIGDGMDATVISGNRSFIDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFFRCAISGYQDSLYTHTMRQFYRECKISGTVDFIFGDATAIFQNCHISARKGLPNQKNTITAHGRKTADEPTGFSIQFCNISADYDLAANSNNTDSNSTTTHTYLGRPWKPYSRTIFMQSYIGDVLRPEGWLEWDGDFALDTLYYAEYMNYGPGAGVASRVKWPGFHVMNDSRQASNFTVSQFIEGNLWLPSTGVTFTAGFGGV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1011 533 Gene3D - 206 530 IPR012334 -
Aed4g1011 533 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 49 530 - -
Aed4g1011 533 PANTHER PECTINESTERASE 49 530 - -
Aed4g1011 533 SMART PMEI_2 24 173 IPR006501 GO:0004857
Aed4g1011 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 166 IPR035513 -
Aed4g1011 533 Pfam Plant invertase/pectin methylesterase inhibitor 30 157 IPR006501 GO:0004857
Aed4g1011 533 Pfam Pectinesterase 212 516 IPR000070 GO:0030599|GO:0042545
Aed4g1011 533 ProSitePatterns Pectinesterase signature 2. 356 365 IPR033131 -
Aed4g1011 533 SUPERFAMILY Pectin lyase-like 210 529 IPR011050 -
Aed4g1011 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 176 IPR035513 -
Aed4g1011 533 CDD PMEI-like_4 18 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1011 Aed-Chr4 9250637 9256913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1011 22 530 Carbohydrate Esterase AT3G43270 63.671 0.0 702