Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1010 ATGGCTCTTGTCATGACAAAAAAGCTTAGTACTACTCCAACTCCCACCACCACATTCATTTTCTTCTTCTTGTTCCTCCTCTCTGTTCGCTCTGAATTCGGGGGACTCGGTAGCCTGAAAGTTTCTCCTTCTAATTTCATATACTCGGTGACAACAGTTGGTGATGTTTTGCGAAAAGTTATCTCCACTCTCGAGTCTGAGTTCAGCAACAATGTCAACAATGACAACGACTTTCGTCTCTCCGACGCCATTTCCGCGTGTCTCGATTTGCTAGACTTGTCAGCTGATGAACTCAGCTGGTCCATTTCAGCTGTCCAAAGTCCCCAAGGGAAGCATAACAGTACTGGGAATATGAGTCCTGATTTGAGGACATGGCTGAGTGCTGTACTTGCGAATACAGACACATGCATGGATGGTTTTGAAGGTACAGGTGGGAATGGTATAAAGGGTTTAATAACCACTGAAATTAACCGAGCAAAGTGGTTGCTCCAAAAGCTACTGAGCCAGGTGAAGCCTAATAATTATTCGTATGAAGATTTCACTAGAAATATCAGTAGCAGTGACAAATTTCCTTCATGGGTTGAAGCAGAGGAGAAGATGCTGCTGCTGCTGCAGAAAAATGTGGTGTCTTCTGCAGATGCTGTAGTTGCTGCTGATGGGACTGGGAATTTTACTAAGGTGATGGATGCTGTGGAAGCATCACCTGTTTATAGCATGACACGCTTTGTGATACACATAAAGAAGGGTGTTTACATTGAGAATGTTGTGATTAATAAGAAGAAGTGGAACCTTGTGATGATTGGTGAGGGCATGGATGCCACTGTTATCTCTGGTAACTTGAGTCATACTGAATACTTGACCACTTTCAAGACTGCTACCTTTGCTGTGAATGGCAGAGGATTCATAGCAAAAGGCATAACCTTCCGGAACACCGCAGGGCCGAAAAGAAACCAATCTGTGGCGCTAAGATCAGACTCTGACCTCTCAGTGTTCTTCCGATGTGGGATTTCGGGTTACCAAGACAGCCTCTACGCTCACGCCTTGCGCCAATTCTACAGAGAGTGCAAAATCAGCGGCACCGTCGACTTCATATTCGGCCGCGCCAACGCAGTGTTCCAGAACTGCACAATACTGGTGAAAAAAGGCTTACAAGGTCAAAAGAACACGATCACAGCGCAAGGCGAAACAGATCCTTCGCAATCCTCCGGCTTCTCGCTGCAATTCTGCAACATTTCAGCGGATCACGATCTCCAAAACTCGCTTAATACAACCTCGACGTACCTCGGGAGGCCATGGAAGGACTATTCGAGAGCGATTTTCATGCAGTGTTACATCAGCGAGGTGTTGAGTCCAGAAGGGTGGCTAGCGATGGATGGAGAGACGAATTTCAACACTTTGTACTTTGCTGAGTACAAGAATCACGGAGCAGGTGCTAGTCTTGGGAGCAGAGTGAAATGGCCGGGGTACCATGTGATCAATGATGATCGTGAAGCTTTTAAGTTTACTGTGGCGAATCTCATTCTGGGGGATTTGTGGTTACCTTCGACTGGTGTAGCGTTCGTTCCTGGACTTAGGGTTTGA 1581 0.4624 MALVMTKKLSTTPTPTTTFIFFFLFLLSVRSEFGGLGSLKVSPSNFIYSVTTVGDVLRKVISTLESEFSNNVNNDNDFRLSDAISACLDLLDLSADELSWSISAVQSPQGKHNSTGNMSPDLRTWLSAVLANTDTCMDGFEGTGGNGIKGLITTEINRAKWLLQKLLSQVKPNNYSYEDFTRNISSSDKFPSWVEAEEKMLLLLQKNVVSSADAVVAADGTGNFTKVMDAVEASPVYSMTRFVIHIKKGVYIENVVINKKKWNLVMIGEGMDATVISGNLSHTEYLTTFKTATFAVNGRGFIAKGITFRNTAGPKRNQSVALRSDSDLSVFFRCGISGYQDSLYAHALRQFYRECKISGTVDFIFGRANAVFQNCTILVKKGLQGQKNTITAQGETDPSQSSGFSLQFCNISADHDLQNSLNTTSTYLGRPWKDYSRAIFMQCYISEVLSPEGWLAMDGETNFNTLYFAEYKNHGAGASLGSRVKWPGYHVINDDREAFKFTVANLILGDLWLPSTGVAFVPGLRV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1010 526 SMART PMEI_2 42 173 IPR006501 GO:0004857
Aed4g1010 526 Pfam Plant invertase/pectin methylesterase inhibitor 59 150 IPR006501 GO:0004857
Aed4g1010 526 CDD PMEI-like_4 31 174 - -
Aed4g1010 526 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 171 IPR035513 -
Aed4g1010 526 SUPERFAMILY Pectin lyase-like 209 523 IPR011050 -
Aed4g1010 526 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 160 IPR035513 -
Aed4g1010 526 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 41 524 - -
Aed4g1010 526 PANTHER PECTINESTERASE 41 524 - -
Aed4g1010 526 ProSitePatterns Pectinesterase signature 2. 357 366 IPR033131 -
Aed4g1010 526 Gene3D - 208 524 IPR012334 -
Aed4g1010 526 Pfam Pectinesterase 213 510 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1010 Aed-Chr4 9234290 9236569 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1010 17 524 Carbohydrate Esterase AT3G43270 52.672 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1010 K01051 - gmx:100798620 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2199 6 24243165 24246578 Aed4g1010 4 9234290 9236569 PCT