Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0990 ATGGATAGCGATGGAGAACCAAAATCGCCGAGTGGAATCAGGCAGATAGTGAAGCTAAAGGAAATGCTCCAGAAGTGGCAAAGTGTGACATTAGGCCCAAGAGCTTCCACTTCCTCCGATGCGACCAACAACGACACCGATAATGATGGCGACAGCTTGTTACCATTGATGAACAAAAGGGTACTGAACGTGATGCACTGCGACTTGGACGACGAGGACTGTTGTGAGAGCCCCGCGGAGCCGCACCCGCCGCCCGATGTCCCGGAAGGGTACTTGGCGGTGTATGTCGGGCCGGAGCTAAGGAGGTTCATCATCCCCACCAGCTACCTCAGCCACTCCTTGTTCAAGGTTTTGCTTGAGAAGGCTGCTGATGAGTTTGGTTTTGACCAGAGTGGAGGACTCAACATCCCTTGCGAGATTGAGACCTTCAAGTATCTCCTCAAGTGCATGGAGAATGAGCAGAAAGAGAAGCTACTACTCGGTGACAGCGCCCCTGGAAGTTCAGGGACTGTGGAGGAAGAGTAA 525 0.5276 MDSDGEPKSPSGIRQIVKLKEMLQKWQSVTLGPRASTSSDATNNDTDNDGDSLLPLMNKRVLNVMHCDLDDEDCCESPAEPHPPPDVPEGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAADEFGFDQSGGLNIPCEIETFKYLLKCMENEQKEKLLLGDSAPGSSGTVEEE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0990 174 MobiDBLite consensus disorder prediction 30 53 - -
Aed4g0990 174 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 155 IPR003676 GO:0009733
Aed4g0990 174 Pfam Auxin responsive protein 81 149 IPR003676 GO:0009733
Aed4g0990 174 MobiDBLite consensus disorder prediction 30 51 - -
Aed4g0990 174 PANTHER SMALL AUXIN-UP RNA-RELATED 8 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0990 Aed-Chr4 9070484 9074261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0990 11 156 Calmodulin-binding Proteins AT3G43120 60.959 3.67e-62 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0990 K14488 - gmx:100527570 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0990 4 9070484 9074261 Aed4g0990 4 9070484 9074261 ECH
Aed6g2184 6 24113855 24115234 Aed4g0990 4 9070484 9074261 PCT