Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0984 ATGCAGCTTCAACTAACACTCTCCACTCTCTTCCTCTCGTTTCTGCTAACATTAACATCATCTCCAACCGTTTTTTTCACTTCTGCAGCACAAAGCAAGCCGCAGGGTCTGGTCCTCTCCTCGTGCGTGCACGCGCGCTATCCGCGTCTGTGCCTGCGCACCCTCTCCAACTTCGCTGGCCCGGCCAACACGCCCCTCGACGTGGCCCGGGCCTCGCTGCGGGTCAGCCTCGCGCACACGCGCCGCGCCTCAAAGTTCCTTCACGCGCTCTCCAAGGGCGGTGCCTCCGCCATGAGCAAGCGGCAGCGCTCCGCGCTGCGCGACTGCACCGAGCAGATTGCGGACTCCGTCGACCAGCTGCGGCGGAGCCTCGCCGAGCTGCAGCATCTCCGGGCGGAGACGTTCCGTTGGCAGATGAGCAACGCCCTGACGTGGGTCAGCGCCGCCCTCACCGACGGCGACACGTGCCTCGACGGGTTCGCGGGGAACGCCAGGCCCGACGTCAAGCGGAGGGTCACGGATGTCGCGAGAGTCACTAGCAATGCTTTGTATATGATTAATCGGCTCAGTCAGAGTAGAACCGGAAAGCCCAAGCCCAAGACCAAGCCCAGGCCCAGACATCAGCCTCCCTCTGCCTCAAGTACTGAAAAATTGAATTAG 660 0.6227 MQLQLTLSTLFLSFLLTLTSSPTVFFTSAAQSKPQGLVLSSCVHARYPRLCLRTLSNFAGPANTPLDVARASLRVSLAHTRRASKFLHALSKGGASAMSKRQRSALRDCTEQIADSVDQLRRSLAELQHLRAETFRWQMSNALTWVSAALTDGDTCLDGFAGNARPDVKRRVTDVARVTSNALYMINRLSQSRTGKPKPKTKPRPRHQPPSASSTEKLN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0984 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 190 IPR035513 -
Aed4g0984 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 194 - -
Aed4g0984 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 191 IPR035513 -
Aed4g0984 219 PANTHER PECTINESTERASE INHIBITOR 3 10 194 - -
Aed4g0984 219 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 189 IPR006501 GO:0004857
Aed4g0984 219 MobiDBLite consensus disorder prediction 188 219 - -
Aed4g0984 219 CDD PMEI-like_3 40 190 - -
Aed4g0984 219 Pfam Plant invertase/pectin methylesterase inhibitor 38 184 IPR006501 GO:0004857
Aed4g0984 219 SMART PMEI_2 33 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0984 Aed-Chr4 9021401 9022060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0984 33 197 Carbohydrate Esterase AT5G53370 30.233 4.98e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0984 - - gmx:100816686 331.643