Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed4g0977 | ATGGTGAAACCAAAGAGCGTGGAAAAACCTGCGGAGGAACAAAGAAGAGTTCCATCGTTCCGAGGAGTGCGGAAGAGGAAGTGGGGGAAGTACGTGTCGGAAATCAGGCTTCCCAACAGCCGCCAAAGGATTTGGTTGGGCTCCTACGATAGCGCCGAGAAGGCGGCGCGTGCCTTCGACGCGGCTATGTTCTGCTTACGTGGCAGCGGCGCCAACTTTAATTTCCCGAGCGACCCACCCGACATCGCCGGCGGGAGAGCCATGACGCCGCCCCAGATTCAGATCGCCGCGGCGCTTTTCGCCAATTCGGAGCCCCGAAAGGAGTGTTCGGGTCAGCCCGCGGAGTGTTTGACTTCGGATGAGGAAACGACGTCGTTGCCTTTGGACACGGATACATCATCATTTCAATCTCCTCCTCCCTCGGAAGTGACGGTCCAAAACGACACCGAATCACTGTCGATTTCGGATATGTTTTCGGATCGTGGGTCGAATACTTTTGTACCCGATTTCTCCGATTTTCCGAGCTTCGACGATTTCAGCCACGATTTCTTCGTGCATGAGCTTCCTGGTTTCGATTACGAAGAAGAGAACTTGGATGGGTTGATAATTCAGGACTCGTTCTTGTGGAATTTCTAA | 636 | 0.5362 | MVKPKSVEKPAEEQRRVPSFRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAEKAARAFDAAMFCLRGSGANFNFPSDPPDIAGGRAMTPPQIQIAAALFANSEPRKECSGQPAECLTSDEETTSLPLDTDTSSFQSPPPSEVTVQNDTESLSISDMFSDRGSNTFVPDFSDFPSFDDFSHDFFVHELPGFDYEEENLDGLIIQDSFLWNF | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed4g0977 | 211 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 5 | 211 | - | - | |
Aed4g0977 | 211 | PANTHER | TRANSCRIPTION FACTOR AP2-EREBP FAMILY-RELATED | 5 | 211 | - | - | |
Aed4g0977 | 211 | CDD | AP2 | 18 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0977 | 211 | Gene3D | AP2/ERF domain | 19 | 77 | IPR036955 | GO:0003700|GO:0006355 | |
Aed4g0977 | 211 | Pfam | AP2 domain | 18 | 68 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0977 | 211 | PRINTS | Ethylene responsive element binding protein signature | 20 | 31 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0977 | 211 | PRINTS | Ethylene responsive element binding protein signature | 42 | 58 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0977 | 211 | MobiDBLite | consensus disorder prediction | 104 | 145 | - | - | |
Aed4g0977 | 211 | SUPERFAMILY | DNA-binding domain | 19 | 77 | IPR016177 | GO:0003677 | |
Aed4g0977 | 211 | SMART | rav1_2 | 19 | 82 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0977 | 211 | ProSiteProfiles | AP2/ERF domain profile. | 19 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Aed4g0977 | 211 | MobiDBLite | consensus disorder prediction | 116 | 145 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed4g0977 | Aed-Chr4 | 8934456 | 8935091 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed4g0977 | 20 | 211 | AP2-EREBP Transcription Factor Family | AT1G19210 | 48.259 | 2.07e-48 | 155 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Aed4g0977 | AP2 | 2.9e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed4g0977 | - | - | gmx:100813688 | 305.834 |