Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0975 ATGTCGAGCTCATCGGAGTACTCTGAATTTTCCGGCCAGAAGGCGGCGAGGTCGCCGGAGAAGTCGAGCTTCTCGCAGACTTGCAGTCTGTTGAGTCAGTACATCAAGGAGAAGGGTAGCTTCGGAGATCTTACCCTCGGTATGACATGCAGCACCGAACAACCATGTGGTTCACCTGAGACATCTTGTCAATCTGCTACAACCATGAATCTGTTTCCTACCAAGGAAAACAACGTGTCACCAAAGAACCTAACCGCTATGGATTTGCTCTCTCCACAAGCTTCCTCATATCGTCCCTCAGAGGAGATTCCAACCTTGGTTAATTCAAGTGCAATTAAGTCCATGAGCAAGGGTGCTAAAACTGCACAGATGACAATCTTCTATGGTGGACAAGTTGTTGTGCTTGATGAATTTCCTGCTGAGAAAGCAAGTGAGATCATGTTTTATGCTAGCAAAGGGATCATCCCCCCAAAAAGCCAGAACAATTCTTCTGTCTACACCTACACACAGAGCCAGCCTTCTTTCCCTGCTAAGTTGGTCAGAACTTCTGCTGATTCAAGTGCTCCAATTGTGAATGTTACCAACTCCATTCATGAACACCCTCAAGTATCAGCAACACCTGTTGTCTGTGGTCTTCCAATTGCTAGAAAAGCTTCACTCCACCGGTTTCTTGAGAAGAGAAAGGATAGAATTGCTTCCAAAGCACCATATCAAGTACCAAATGGGCTTTACAACAAGCCAGTTGAGTCCATGCCATGGCTTGGGCTTAGTGCTTCTTCACCTCAAATCTGA 792 0.4609 MSSSSEYSEFSGQKAARSPEKSSFSQTCSLLSQYIKEKGSFGDLTLGMTCSTEQPCGSPETSCQSATTMNLFPTKENNVSPKNLTAMDLLSPQASSYRPSEEIPTLVNSSAIKSMSKGAKTAQMTIFYGGQVVVLDEFPAEKASEIMFYASKGIIPPKSQNNSSVYTYTQSQPSFPAKLVRTSADSSAPIVNVTNSIHEHPQVSATPVVCGLPIARKASLHRFLEKRKDRIASKAPYQVPNGLYNKPVESMPWLGLSASSPQI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0975 263 MobiDBLite consensus disorder prediction 1 24 - -
Aed4g0975 263 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 257 IPR040390 -
Aed4g0975 263 Pfam Jas motif 213 238 IPR018467 -
Aed4g0975 263 Pfam tify domain 120 151 IPR010399 -
Aed4g0975 263 SMART tify_2 117 152 IPR010399 -
Aed4g0975 263 PANTHER PROTEIN TIFY 10A 17 257 - -
Aed4g0975 263 ProSiteProfiles Tify domain profile. 117 152 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0975 Aed-Chr4 8917228 8919954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0975 1 258 Tify Gene Family AT1G19180 42.086 7.20e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aed4g0975 tify 6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0975 K13464 - gmx:100801449 423.705