Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0973 ATGGCCTTAGCTCTTTCCTCCACCGCATTGTCAACTCTTCCAAACAGAGAAATTCGTCAAAAGGGTTTCCCAGAAAGAACACCCACATGCTTGAGTTTGACAAAAAGAACAACAATTGCAAATGCAACAAAAGGAGTCTCAGCTGTCTGTGAGCCACTTCCTCCTGATAGACCATTGTGGTTCCCTGGCAGCTCTCCTCCTGACTGGCTTGATGGCAGTCTTCCTGGTGATTTCGGTTTCGATCCTCTTGGATTAGGGTCTGATCCAGAGTTGCTAAAGTGGTTCGCTCAAGCAGAACTAATTCACGGAAGATGGGCAATGCTTGCAGTGTTCGGAATCCTCGTTCCAGAATTACTCGAAAGGATTGGTTACGTTGAGAATTTCAATTGGTACGACGCTGGTGCGCGAGAGTATTTTGCAGACCCAACAACTTTGTTCTTTGTGCAAATGGGCCTAATGGGCTGGGTGGAGGGTCGTAGATGGGCCGACATCGTTAACCCGGGGAGTGTTGACATTGAGCCCAAGGTGCCGCACGTAACGAACCCTAAGCCCGACGTCGGGTACCCGGGCGGGTTGTGGTTCGACCCGATGATGTGGGGGCGCGGGTCACCCGAGCCAGTGATGGTGCTGAGGACCAAGGAGATCAAGAATGGAAGGCTTGCAATGCTGGCCTTTGTTGGGTTCTGGTTCCAAGCTATTTACACGGGGGAAGGACCCATTGAGAATTTGATGGCACACATTGCTGATCCTGGTCACTGCAATATTTTTTCGGCTTTCACGCGTTAG 786 0.5064 MALALSSTALSTLPNREIRQKGFPERTPTCLSLTKRTTIANATKGVSAVCEPLPPDRPLWFPGSSPPDWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELIHGRWAMLAVFGILVPELLERIGYVENFNWYDAGAREYFADPTTLFFVQMGLMGWVEGRRWADIVNPGSVDIEPKVPHVTNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHIADPGHCNIFSAFTR 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0973 261 SUPERFAMILY Chlorophyll a-b binding protein 56 259 - -
Aed4g0973 261 Gene3D Chlorophyll a/b binding protein domain 67 252 - -
Aed4g0973 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 259 IPR001344 GO:0009765|GO:0016020
Aed4g0973 261 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Aed4g0973 261 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0973 Aed-Chr4 8893009 8895677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0973 55 260 Chloroplast and Mitochondria Gene Families AT3G61470 66.505 4.83e-101 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0973 K08908 - gmx:100800374 524.628