Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0967 ATGGCATTCGAGTCCAGCGAAGTCGCGCCGCTCCAATCCATACGCTACAACCGCGGTTCTCTCCAGCTTCTCGATCAGAGGAAGCTCCCTCTGGAGACAGTTTACTTGGAAATTCGGGATTCAACAGATGGCTGGAATGCCATACGGGACATGGTGGTCCGAGGAGCACCTGCTATTGCGGATGCAGCAGCACTCTCTTTGGCTGTGGAAGTGTTCAATTTAGATTTTAATGGGTCAGCTGCTGATGCTGTTTCCTTCCTGCAGGAGAAATTAGAATATCTAGTCACAAGTCGTCCAACTGCAGTGAACCTATCAGATGCTGCGACAAAACTCAAAGAAGTCATATCAAATGCTGCTGCCACCACTTCAGAGGGAAGGAGTGTTTTCCAGGTTTATATAGAGGCTTCTGAAGTTATGCTTGAGGATGATGTTGCTTCAAATAAAGCTATTGGTTCTTATGGAGCTAGTATTATTCAACAACAAACAGAGAAACAAAAACTTTCTGTTTTGACTCATTGCAATACTGGAAGTCTAGCCACAGCTGGATATGGCACTGCTCTGGGTGTGATCCGTGCACTTCATAGTGCAGGAGTTCTAGAAAGGGCTTATTGCACAGAAACACGTCCATTCAATCAAGGATCTAGGCTTACTGCCTTTGAGTTGGTGCATGAAAAAATACCAGGAACTCTTATTGCTGATTCTGCTGCAGCTGCATTAATGAAAGCTGGACGCGTGGATGCTGTTGTTGTTGGGGCAGATCGCATTGCATCAAACGGTGACACAGCCAACAAAATTGGAACCTACAGCGTTGCCTTGTCCGCTAAGTTTCATAATGTACCTTTCTATGTGGCTGCACCCATCACTTCCATTGACCTATCACTTTCTTCTGGACAAGAAATCGTCATTGAGGAGAGGTCTCCCAAGGAATTGCTGAACACACATGGAGGACTTGGAGAGCAGATTGCTGCCTCAGGAATTTCTGTGTGGAACCCGGCTTTCGACGGTGTCATTACGAAGACATCTGCTGGTGATGCATTTGACATCAAAGCTTTCGTACAGAAAACAGGTTGA 1071 0.4603 MAFESSEVAPLQSIRYNRGSLQLLDQRKLPLETVYLEIRDSTDGWNAIRDMVVRGAPAIADAAALSLAVEVFNLDFNGSAADAVSFLQEKLEYLVTSRPTAVNLSDAATKLKEVISNAAATTSEGRSVFQVYIEASEVMLEDDVASNKAIGSYGASIIQQQTEKQKLSVLTHCNTGSLATAGYGTALGVIRALHSAGVLERAYCTETRPFNQGSRLTAFELVHEKIPGTLIADSAAAALMKAGRVDAVVVGADRIASNGDTANKIGTYSVALSAKFHNVPFYVAAPITSIDLSLSSGQEIVIEERSPKELLNTHGGLGEQIAASGISVWNPAFDGVITKTSAGDAFDIKAFVQKTG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0967 356 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 11 349 IPR005251 -
Aed4g0967 356 Gene3D - 10 165 IPR027363 -
Aed4g0967 356 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 39 335 IPR011559 GO:0044249
Aed4g0967 356 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 12 334 IPR005251 -
Aed4g0967 356 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 11 336 - -
Aed4g0967 356 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 11 336 - -
Aed4g0967 356 Pfam Initiation factor 2 subunit family 53 335 IPR000649 GO:0044237
Aed4g0967 356 SUPERFAMILY NagB/RpiA/CoA transferase-like 10 336 IPR037171 -
Aed4g0967 356 Gene3D - 166 339 IPR042529 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0967 50 354 Eukaryotic Initiation Factors Gene Family AT2G05830 74.766 4.32e-163 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0967 K08963 - gmx:100799311 618.616