Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0957 ATGACCCTTATGAAAACCCTATGGAAATCAATCTTCCCCGGTTGCTACAAGGGTGAATATCCGTCTCCAAAGCCAAAGAAAGTGGTCGCTACAAAGCCAAACTCTTCACACAGGATCTCAGTGATGGATTTGAGTTATCCAAGCACCACTCTTTCGGAGGATCTCTCAATTTCTCTAGCGGGGATCAACCTCCATGTTTTCTCGCTCGGTGAGCTCAAGATCATGACGCAACAATTCTCTTCCAGCAACTTTCTAGGAGAAGGCGGGTTTGGACCCGTGCATAAGGGGTTCATTGATGACAAGCTTAGGCATGGCCTCAAGGCTCAACCGGTGGCGGTTAAGCTCTTGGACTTGGATGGCTCACAAGGCCACAAAGAATGGTTGACTGAGGTTGTTTTTCTGGGGCAACTAAGGCATCCACATCTCGTGAAGCTGATAGGATACTGTTGTGAAGAAGAGCACAGGGTTTTGGTGTATGAATATTTACCAAGAGGAAGCTTGGAGAATCATTTATTTAGAAGATTCTCGGCTTCACTTGCATGGTCAACGAGAATGAAAATTGCTGTTGGAGCTGCGAAGGGTCTGGCTTTTCTTCATGAAGCCGAGAAGCCAGTCATCTATAGAGATTTCAAAGCTTCTAATATCTTGTTAGACTCTGATTACAACGCAAAACTCTCTGATTTTGGGTTGGCAAAAGACGGCCCCGAAGGAGATGACACCCACGTTTCAACCCGAGTCATGGGCACACACGGCTACGCAGCTCCAGAATACGTCATGACAGTGGTGAGGACCCTCGAGCCACTCCAGGACTTTGATGACATTCCAATTGGAACATTTGTCTACACTGCTCCACCGGATCATAGTGGTAATAACGAAAGGGATCAATTATGTGACACACCTAAGAGGAGGGAAAATGGTAGTGGTAACAATAGGAACAATGGTGGTCACACGCATCATCATAGGCATCATCCACTTAAATCTCCCAAGACCCCGACAAGGCCACAATCACAATCACAACATGATTTAGTTTCTTCAATTAAGGAAGGAGTAGAGGAAGTTAATTAA 1065 0.4573 MTLMKTLWKSIFPGCYKGEYPSPKPKKVVATKPNSSHRISVMDLSYPSTTLSEDLSISLAGINLHVFSLGELKIMTQQFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRVLVYEYLPRGSLENHLFRRFSASLAWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYVMTVVRTLEPLQDFDDIPIGTFVYTAPPDHSGNNERDQLCDTPKRRENGSGNNRNNGGHTHHHRHHPLKSPKTPTRPQSQSQHDLVSSIKEGVEEVN 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0957 354 MobiDBLite consensus disorder prediction 314 328 - -
Aed4g0957 354 Gene3D Phosphorylase Kinase; domain 1 42 161 - -
Aed4g0957 354 Gene3D Transferase(Phosphotransferase) domain 1 162 272 - -
Aed4g0957 354 MobiDBLite consensus disorder prediction 329 344 - -
Aed4g0957 354 MobiDBLite consensus disorder prediction 281 354 - -
Aed4g0957 354 SUPERFAMILY Protein kinase-like (PK-like) 49 262 IPR011009 -
Aed4g0957 354 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 260 313 - -
Aed4g0957 354 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 23 260 - -
Aed4g0957 354 PANTHER OS01G0588500 PROTEIN-RELATED 260 313 - -
Aed4g0957 354 ProSiteProfiles Protein kinase domain profile. 79 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0957 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Aed4g0957 354 PANTHER OS01G0588500 PROTEIN-RELATED 23 260 - -
Aed4g0957 354 MobiDBLite consensus disorder prediction 291 305 - -
Aed4g0957 354 Pfam Protein tyrosine and serine/threonine kinase 83 261 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0957 Aed-Chr4 8747024 8750241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0957 62 260 Glycoside Hydrolase AT3G07070 54.950 3.94e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed4g0957 PK_Tyr_Ser-Thr 5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0957 - - gmx:100783759 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0957 4 8747024 8750241 Aed4g0957 4 8747024 8750241 ECH