Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0948 ATGGAGGGTGGTGGCGGTAGCGTTGGTAGCGTTGGGCATTGGGTGATGGAGTACATTCTCCGGTGCCAAGACCCACTCTTCCCCAGTGACCTGATCAAAAAATATCTCAGCATAACCCCGCTTCCAGTCAACGATTCCAAGCTCAAGAAAATGCTCCTCCTCCGAACCCTCCAAGACTACCTGCACGACGTTTCCCTCCCCGAAAAAACCCTCGAGATCATGGAACTCTACGAGGAGCTCCTCCGCCGAGACGCTGCTCCGGTCACCGCCGCCATGCGCTCCGCCTACTGCGCCCTCGCGCTCGAGTGCACTCTCCGCCACCTCCTCGTCGACCTCCGCGCCGAGAGCCCCGGCTACCTCGGCGCCGTCCACAGGATTTGGCGCGCCAGGGGTCCGTTGATGAGCGGCACCGGTAACGGTACCGGAGCAGTCAGCCGTCTCGTCTCGCCGGAGCTGGAGCGGTGGAGATCGGAGATTTTGGATTCCGTAACGGATTCGACGGCGAGGGAGAGGCTGGCCTCCGTTGATACCAGAAGAGACGCGATCGTGAAGCTTAGGGCTTATTTGAAGGAAGCGTGGGCCGATTTGGGGCCTTCGTTTATTGAGATTGCGGCGGCGAAGCACTTGGAGGCCCAACGACAACAGAGAGCAGAAATTGAGAATGGCACTGCTGCTGCTGAGGAAGTGAATCCCTCAACTGCTGGTGAGGTCCAACAGGTTGGGGAATGTGGTTCTGAGGAGTTGCAAAAGTTTGCTGAGGATTCTCTACTTAATTCGTTGGAAAAAGAGAGTAGAGATGCAGATGTAACTTGCCTGCATGTTGTTGTTAATAACAATGAGGCTGATCTGATGAAGAAGGATCAAGCTTCTGCCCCTCATGATGATGATGACCATAGGCCGAGTTTAATGGAAAGAGACAACATAGGCCAGGATTCTGCGGAGTTGCAAAAGTTGGCTGAGGATTCTCAACTTAATTCGTTGCAAGTGAATGAGGCAGCACCGATTGAAGAACAGAGTAGAGATGCAGATGTACCTTGCCCACATGATGTTATTAATAACAATGAGGCTGATATGATGGAAAATGATCAAAGCTCTGCCCCTCAAAATGATGATGGCCATAGGCCAAGTTTAATGGAAAGAGATGACATAGGCCAAGGTTCTGAGGAGTTGCAAAAGTTGGCTAAGTTGGAAGTGAACAAGGAGGCTCCAATTGAAGAACAGAGTCGAGATGGAGATGTAACTTGCCCACATGCTGTTAATAACAATGAGGCTGATATGATGGAAAATGATCAAACTTCTGCCCCTCATAATGATGATGACCATATGCCAAGTTTAATGGAAAGAAATGGTACTGCTCGTGTTTACGAGTGGGATGATTCAACTGACGCTTTGGATGAAGAAAGATCAGATCATGCAAATAGGTTTCAGTTACCTAGTCCCAAGGGGAAAAAACATTCTCCATTGGTAACGTATAGACCACCAAGCATTTCAAAGAGGAGAAAACTGAAAAGATGGAGTCAATTGGAAGAGGAGACTCTAAAGACTGCCGTAGACAAGTTTGGTAGGGGAAATTGGAAGATAATCCTAGATTCTCACAAAGATATATTTGAAGAGAGAACTGAAGTTGATTTGAAGGATAAGTGGAGAAACATGACAAAGTAA 1662 0.4898 MEGGGGSVGSVGHWVMEYILRCQDPLFPSDLIKKYLSITPLPVNDSKLKKMLLLRTLQDYLHDVSLPEKTLEIMELYEELLRRDAAPVTAAMRSAYCALALECTLRHLLVDLRAESPGYLGAVHRIWRARGPLMSGTGNGTGAVSRLVSPELERWRSEILDSVTDSTARERLASVDTRRDAIVKLRAYLKEAWADLGPSFIEIAAAKHLEAQRQQRAEIENGTAAAEEVNPSTAGEVQQVGECGSEELQKFAEDSLLNSLEKESRDADVTCLHVVVNNNEADLMKKDQASAPHDDDDHRPSLMERDNIGQDSAELQKLAEDSQLNSLQVNEAAPIEEQSRDADVPCPHDVINNNEADMMENDQSSAPQNDDGHRPSLMERDDIGQGSEELQKLAKLEVNKEAPIEEQSRDGDVTCPHAVNNNEADMMENDQTSAPHNDDDHMPSLMERNGTARVYEWDDSTDALDEERSDHANRFQLPSPKGKKHSPLVTYRPPSISKRRKLKRWSQLEEETLKTAVDKFGRGNWKIILDSHKDIFEERTEVDLKDKWRNMTK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0948 553 ProSiteProfiles Myb-like domain profile. 497 552 IPR001005 -
Aed4g0948 553 MobiDBLite consensus disorder prediction 334 353 - -
Aed4g0948 553 MobiDBLite consensus disorder prediction 360 383 - -
Aed4g0948 553 PANTHER MYB TRANSCRIPTION FACTOR 11 553 - -
Aed4g0948 553 SUPERFAMILY Homeodomain-like 499 552 IPR009057 -
Aed4g0948 553 PANTHER MYB TRANSCRIPTION FACTOR 11 553 - -
Aed4g0948 553 MobiDBLite consensus disorder prediction 460 503 - -
Aed4g0948 553 MobiDBLite consensus disorder prediction 286 304 - -
Aed4g0948 553 MobiDBLite consensus disorder prediction 283 304 - -
Aed4g0948 553 Pfam Myb-like DNA-binding domain 503 551 IPR001005 -
Aed4g0948 553 MobiDBLite consensus disorder prediction 460 474 - -
Aed4g0948 553 CDD SANT_TRF 503 553 - -
Aed4g0948 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 497 553 IPR017930 -
Aed4g0948 553 Gene3D - 505 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0948 Aed-Chr4 8686424 8691137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0948 459 551 Single Myb Histone (SMH) Gene Family AT1G15720 38.947 8.59e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed4g0948 Myb_DNA-binding 5.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0948 - K11111 gmx:100777809 375.555