Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0934 ATGCTTACGTGCATAGCACGTCCGAAGAAACTCGCTGACGACTCAGCGAGTGACGATCCGAGTTCGCGAAGCCAGGGAGTGAAGTCGCTGACGTGTCAGCTGAAGGAGATGGCGCTGAAGGCGTCGGGGGCGTACAAGCAGTGCGGCCCGTGCGCGACGACGGCGGCGAGTCGCGGTGAGTCGGAGTCGTCGTCTTCGTCGCGGCGGCGGTGGGGGAAGGAGTTGGAGGCGCGGCTGAAGGGGATATCGAGCGGGGAGGGGACGCCGAGCTCGAGCGGCAGGAGGAGGGCGGCGGTGCTGCTGCTGGAGGACGAGGAGGACCCCAAGGAGTGGGTTGCGCAGCTGGAGCCCGGCGTTTTGATCACCTTCTTGTCGCTTCCGCGTGGCGGGAACCATCTCAAACGTATACGCTTCAGTCGCGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTACGACAAGGTAATGGAACTTTACAATGTTGAAAGGCTTAACCGTCAAGCTTTCCCTCTTCCAACTCCACCAAGGTCTGAAGACGAGAGTTCAAAGCGTGAATCAATAGAAGATTTCCCTGTGACACCTCCACTGAGTAGGGAAAGGCCACCATACCGTGCAGGGTCATCCTCAGATTCGTTTGATCAGCAGTCAATGCAGTCCCAGTCCCGGCATAATTATTACTATGACCCCAATGGTGTGACTGTGAACTCAACCCCAAAGGCTTCCACCATTAGTGTTGCAGCCAAGACAGATATCTCATCATCGATGGATGCCGATGCCGATGCTTCCATAAGAAGTAGCTCATCCAGAGAAGCTGATCGCTCTGGGGACCTATCAATCAGCAATGCCAGTACTGACCTTGACACTGAATGGGTTGAGCAGGATGAACCTGGGGTTTACATTACCATCAGAGCTCTCCCAGGTGGCAAAAAGGAGCTCAGACGAGTCAGGTTCAGTCGAGAAAAGTTTGGGGAGATGCATGCTAGACTGTGGTGGGAAGAGAATCGTGCCAGAATACATGAACATTACTTGTGA 1044 0.546 MLTCIARPKKLADDSASDDPSSRSQGVKSLTCQLKEMALKASGAYKQCGPCATTAASRGESESSSSSRRRWGKELEARLKGISSGEGTPSSSGRRRAAVLLLEDEEDPKEWVAQLEPGVLITFLSLPRGGNHLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVERLNRQAFPLPTPPRSEDESSKRESIEDFPVTPPLSRERPPYRAGSSSDSFDQQSMQSQSRHNYYYDPNGVTVNSTPKASTISVAAKTDISSSMDADADASIRSSSSREADRSGDLSISNASTDLDTEWVEQDEPGVYITIRALPGGKKELRRVRFSREKFGEMHARLWWEENRARIHEHYL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0934 347 MobiDBLite consensus disorder prediction 256 285 - -
Aed4g0934 347 MobiDBLite consensus disorder prediction 172 241 - -
Aed4g0934 347 MobiDBLite consensus disorder prediction 51 70 - -
Aed4g0934 347 ProSiteProfiles BRX domain profile. 292 347 IPR013591 -
Aed4g0934 347 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 347 IPR044532 -
Aed4g0934 347 Pfam Transcription factor regulating root and shoot growth via Pin3 109 163 IPR013591 -
Aed4g0934 347 Pfam Transcription factor regulating root and shoot growth via Pin3 292 346 IPR013591 -
Aed4g0934 347 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 347 - -
Aed4g0934 347 MobiDBLite consensus disorder prediction 1 28 - -
Aed4g0934 347 MobiDBLite consensus disorder prediction 211 241 - -
Aed4g0934 347 Pfam Transcription factor BRX N-terminal domain 25 51 IPR027988 -
Aed4g0934 347 ProSiteProfiles BRX domain profile. 109 164 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0934 Aed-Chr4 8545066 8551365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0934 1 347 Major Intrinsic Protein MIP AT1G31880 42.821 2.80e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0934 - - gmx:100791360 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0934 4 8545066 8551365 Aed4g0934 4 8545066 8551365 ECH
Aed6g2135 6 23788879 23793944 Aed4g0934 4 8545066 8551365 PCT