Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0924 ATGAATAAAGGGAGCATAAGTCTCAAACTCACTGTTCCTGCATCTAGTCGGGGTTCATTCACCAAGTTCCTGTCTGAGCCTGAAAGTGGAACGTTTAAGGTTGGAGACTTGCTTGTGAATAAGGAAGGAGTTCGAATTCTCTCTGAGAATGAAGTGGAAGCTCCTCCCCCAATCAGGGCACAAGATAACCAGATAAGTTTGGCAGACATTGATGCAATCAAAGTGATTGGAAAAGGAAATGGAGGGATAGTTCAATTGGAAATTCAAATGACTATTGAGGAGCCGATCCGCAGGCAGATAGCACAAGAGCTAAAAATTAATCAATCAGCACAATGCCCCTATGTTGTTGTCTGCTACCATTCATTCTATTACAACGGTGTGCTGAAGGGTTTAATGTATCTTCACCATGAAAAACACATTATCCATAGGGACTTAAAACCTTCTAATCTGCTGATAAATCATAGAGGGGAGGTAAAGATTACTGACTTTGGTGTTAGTGTAATCATGGAAAATACATCTGGTCAAGCAAATACATTCATTGGCACACACAGCTATATGTCTCCTGAGAGAATCATTGGTAACCAGCATGGCTACAACTACAAAAGTGATATATGGAGCTTGGGACTGATTTTGCTCAAGTGTGCTACAGGGCAGTTTCCATATACACCACCGGATCATCGCGAAGGATGGGAAAATATTTTCCAGCTTATTGAAGTCATTGTGGAAAAGCCTTCTCCCATTGCTCCATCAGATGAATTTTCTCCAGAATTTTGCTCATTTATCTCAGCATGTTTACAGAAAAATCCAGGGGATAGACCGTCAGCTCAGGATCTTATAAATCATCCTTTTATCAACATGCATGAGGACTTGAATGTGGATCTTTCAGCTTATTTCTTCAGCGCAGGATGTACACTTGCAGCCATATAG 927 0.4099 MNKGSISLKLTVPASSRGSFTKFLSEPESGTFKVGDLLVNKEGVRILSENEVEAPPPIRAQDNQISLADIDAIKVIGKGNGGIVQLEIQMTIEEPIRRQIAQELKINQSAQCPYVVVCYHSFYYNGVLKGLMYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSVIMENTSGQANTFIGTHSYMSPERIIGNQHGYNYKSDIWSLGLILLKCATGQFPYTPPDHREGWENIFQLIEVIVEKPSPIAPSDEFSPEFCSFISACLQKNPGDRPSAQDLINHPFINMHEDLNVDLSAYFFSAGCTLAAI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0924 308 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0924 308 Gene3D Transferase(Phosphotransferase) domain 1 93 303 - -
Aed4g0924 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Aed4g0924 308 SMART serkin_6 70 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0924 308 Pfam Protein kinase domain 121 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0924 308 SUPERFAMILY Protein kinase-like (PK-like) 58 290 IPR011009 -
Aed4g0924 308 PANTHER MAP KINASE KINASE 6 127 - -
Aed4g0924 308 PANTHER MAP KINASE KINASE 127 308 - -
Aed4g0924 308 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 127 308 - -
Aed4g0924 308 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 6 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0924 Aed-Chr4 8419060 8424266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0924 28 302 MAP Kinase Kinase Gene Family AT4G26070 54.799 3.78e-123 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Aed4g0924 Pkinase 8.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0924 K20603 - gmx:100789241 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0924 4 8419060 8424266 Aed4g0924 4 8419060 8424266 ECH
Aed6g2124 6 23702749 23708377 Aed4g0924 4 8419060 8424266 PCT